Package: crisprBase
Version: 1.0.0
Date: 2022-03-08
Title: Base functions and classes for CRISPR gRNA design
Authors@R: person("Jean-Philippe", "Fortin", email = "fortin946@gmail.com", role = c("aut", "cre"))
Depends: utils, methods, R (>= 4.1)
Imports: BiocGenerics, Biostrings, GenomicRanges, IRanges, S4Vectors,
        stringr
Suggests: knitr, rmarkdown, testthat
biocViews: CRISPR, FunctionalGenomics
Description: Provides S4 classes for general nucleases, CRISPR nucleases and base editors.
    Several CRISPR-specific genome arithmetic functions are implemented to
    help extract genomic coordinates of spacer and protospacer sequences. 
    Commonly-used CRISPR nuclease objects are provided that can be readily
    used in other packages. Both DNA- and RNA-targeting nucleases are supported.
License: MIT + file LICENSE
Encoding: UTF-8
RoxygenNote: 7.1.2
VignetteBuilder: knitr
BugReports: https://github.com/Jfortin1/crisprBase/issues
URL: https://github.com/Jfortin1/crisprBase
Collate: 'AllGenerics.R' 'Nuclease-class.R' 'CrisprNuclease-class.R'
        'BaseEditor-class.R' 'arithmetics.R' 'data.R' 'utils.R'
        'annotateMismatches.R'
LazyData: true
git_url: https://git.bioconductor.org/packages/crisprBase
git_branch: RELEASE_3_15
git_last_commit: 9c1d3b6
git_last_commit_date: 2022-04-26
Date/Publication: 2022-04-26
NeedsCompilation: no
Packaged: 2022-04-26 22:09:03 UTC; biocbuild
Author: Jean-Philippe Fortin [aut, cre]
Maintainer: Jean-Philippe Fortin <fortin946@gmail.com>
Built: R 4.2.0; ; 2022-04-27 09:21:48 UTC; windows
