bam2gr	bam2gr
candidate.region	candidate.region
chromosome	pics-generics
chromosome,data.frame-method	pics-generics
chromosome,pics-method	pics-class
chromosome,picsError-method	picsError-class
chromosome,picsList-method	picsList-class
code	pics-generics
code,pics-method	pics-class
code,picsError-method	picsError-class
code,picsList-method	picsList-class
delta	pics-generics
delta,data.frame-method	pics-generics
delta,pics-method	pics-class
delta,picsError-method	picsError-class
delta,picsList-method	picsList-class
K	pics-generics
K,pics-method	pics-class
K,picsError-method	picsError-class
K,picsList-method	picsList-class
length,picsList-method	picsList-class
length,segReadsList-method	segReads-class
makeGRangesOutput	makeGRangesOutput
map	segReads-class
map,segReads-method	segReads-class
map,segReadsList-method	segReads-class
maxRange	pics-generics
maxRange,pics-method	pics-class
maxRange,picsError-method	picsError-class
maxRange,picsList-method	picsList-class
minRange	pics-generics
minRange,pics-method	pics-class
minRange,picsError-method	picsError-class
minRange,picsList-method	picsList-class
mu	pics-generics
mu,data.frame-method	pics-generics
mu,pics-method	pics-class
mu,picsError-method	picsError-class
mu,picsList-method	picsList-class
PICS	PICS
pics-class	pics-class
pics-generics	pics-generics
picsError-class	picsError-class
picsFDR	picsFDR
picsList-class	picsList-class
plot,pics,segReads-method	plot-pics
plot,picsError,segReads-method	plot-pics
plot,picsList,picsList-method	plot-FDR
plot,picsList,segReadsList-method	plot-pics
plot-FDR	plot-FDR
plot-pics	plot-pics
score	pics-generics
score,data.frame-method	pics-generics
score,pics-method	pics-class
score,picsError-method	picsError-class
score,picsList-method	picsList-class
scoreForward	pics-generics
scoreForward,data.frame-method	pics-generics
scoreForward,pics-method	pics-class
scoreForward,picsError-method	picsError-class
scoreForward,picsList-method	picsList-class
scoreReverse	pics-generics
scoreReverse,data.frame-method	pics-generics
scoreReverse,pics-method	pics-class
scoreReverse,picsError-method	picsError-class
scoreReverse,picsList-method	picsList-class
se	pics-generics
se,data.frame-method	pics-generics
se,pics-method	pics-class
se,picsError-method	picsError-class
se,picsList-method	picsList-class
seF	pics-generics
seF,data.frame-method	pics-generics
seF,pics-method	pics-class
seF,picsError-method	picsError-class
seF,picsList-method	picsList-class
segChrRead	segChrRead
segmentPICS	segmentPICS
segReads	segReads-class
segReads-class	segReads-class
segReadsGeneric	segReadsGeneric
segReadsList	segReads-class
segReadsList-class	segReads-class
segReadsListPE	segReadsListPE-class
segReadsListPE-class	segReadsListPE-class
segReadsPE	segReadsPE-class
segReadsPE-class	segReadsPE-class
seR	pics-generics
seR,data.frame-method	pics-generics
seR,pics-method	pics-class
seR,picsError-method	picsError-class
seR,picsList-method	picsList-class
setParaEM	setParaEM
setParaPrior	setParaPrior
show,pics-method	pics-class
show,picsError-method	picsError-class
show,picsList-method	picsList-class
show,segReads-method	segReads-class
show,segReadsList-method	segReads-class
sigmaSqF	pics-generics
sigmaSqF,data.frame-method	pics-generics
sigmaSqF,pics-method	pics-class
sigmaSqF,picsError-method	picsError-class
sigmaSqF,picsList-method	picsList-class
sigmaSqR	pics-generics
sigmaSqR,data.frame-method	pics-generics
sigmaSqR,pics-method	pics-class
sigmaSqR,picsError-method	picsError-class
sigmaSqR,picsList-method	picsList-class
summary,pics-method	pics-class
summary,picsList-method	picsList-class
summary,segReads-method	segReads-class
summary,segReadsList-method	segReads-class
summarySeg	summarySeg
w	pics-generics
w,pics-method	pics-class
w,picsError-method	picsError-class
w,picsList-method	picsList-class
[,picsList,ANY,ANY,ANY-method	picsList-class
[,segReadsList,ANY,ANY,ANY-method	segReads-class
[,segReadsListPE,ANY,ANY,ANY-method	segReadsListPE-class
[[,picsList,ANY,ANY-method	picsList-class
[[,segReadsList,ANY,ANY-method	segReads-class
[[,segReadsListPE,ANY,ANY-method	segReadsListPE-class
