# Generated by roxygen2: do not edit by hand

export(MaxQtoMSstatsTMTFormat)
export(OpenMStoMSstatsTMTFormat)
export(PDtoMSstatsTMTFormat)
export(PhilosophertoMSstatsTMTFormat)
export(SpectroMinetoMSstatsTMTFormat)
export(dataProcessPlotsTMT)
export(groupComparisonTMT)
export(proteinSummarization)
import(data.table)
import(ggplot2)
importFrom(MSstats,MSstatsContrastMatrix)
importFrom(MSstats,dataProcess)
importFrom(MSstats,getSelectedProteins)
importFrom(MSstats,savePlot)
importFrom(MSstats,theme_msstats)
importFrom(MSstatsConvert,MSstatsBalancedDesign)
importFrom(MSstatsConvert,MSstatsClean)
importFrom(MSstatsConvert,MSstatsImport)
importFrom(MSstatsConvert,MSstatsLogsSettings)
importFrom(MSstatsConvert,MSstatsMakeAnnotation)
importFrom(MSstatsConvert,MSstatsPreprocess)
importFrom(MSstatsConvert,MSstatsSaveSessionInfo)
importFrom(grDevices,dev.off)
importFrom(grDevices,hcl)
importFrom(grDevices,pdf)
importFrom(graphics,axis)
importFrom(graphics,image)
importFrom(graphics,legend)
importFrom(graphics,mtext)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,plot.new)
importFrom(graphics,title)
importFrom(lmerTest,lmer)
importFrom(methods,new)
importFrom(stats,anova)
importFrom(stats,coef)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,medpolish)
importFrom(stats,model.matrix)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(stats,pt)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
