bisConversionControl {sesame}

R Documentation

Compute internal bisulfite conversion control

Description

Compute GCT score for internal bisulfite conversion control. The function takes a SigSet as input. The higher the GCT score, the more likely the incomplete conversion.

Usage

bisConversionControl(sdf)

Arguments

sdf

a SigDF

Value

GCT score (the higher, the more incomplete conversion)

Examples

sesameDataCache("EPIC") # if not done yet
sdf <- sesameDataGet('EPIC.1.SigDF')
bisConversionControl(sdf)

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