RGChannelSetToSigDFs {sesame}

R Documentation

Convert RGChannelSet (minfi) to a list of SigDF (SeSAMe)

Description

Notice the colData() and rowData() is lost. Most cases, rowData is empty anyway.

Usage

RGChannelSetToSigDFs(rgSet, manifest = NULL, BPPARAM = SerialParam())

Arguments

rgSet	a minfi::RGChannelSet
manifest	manifest file
BPPARAM	get parallel with MulticoreParam(n)

Value

a list of sesame::SigDF

Examples

if (FALSE) { # to avoid excessive memory usage in package builder
if (require(FlowSorted.Blood.450k)) {
    rgSet <- FlowSorted.Blood.450k[,1:2]
    sdfs <- RGChannelSetToSigDFs(rgSet)
}
}

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