read_enrichment_file {segmenter}

R Documentation

Read enrichment files

Description

The segments files are the output of running learn_model and named <cell>_3_TSS.txt or <cell>_3_TES.txt.

Usage

read_enrichment_file(file, states, regions)

Arguments

file	A string. The path to the file.
states	A character vector. The names of the states.
regions	A character vector. The names of the regions.

Value

A matrix

Examples

# locate the file
fl <- file.path(tempdir(), 'GM12878_3_RefSeqTSS_neighborhood.txt')

# read the file
read_enrichment_file(fl)

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