Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data

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Documentation for package ‘scMAGeCK’ version 1.6.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

scMAGeCK-package	Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data
featurePlot	Detect the sgRNA distribution and generate Vlnplot to identity gene regulation between different cells.
pre_processRDS	Integrate the imformation of sgRNA into RDS file for the further analysis.
scmageck	Identify genes associated with multiple expression phenotypes in single-cell CRISPR screening data
scmageck_lr	Use linear regression to test the association of gene knockout with all possible genes
scmageck_rra	Use RRA to test the association of gene knockout with certain marker expression
selectPlot	generate the selection plot