# Random Rotation Methods for High Dimensional Data with Batch Structure

## Documentation for package ‘randRotation’ version 1.6.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

randRotation-package | randRotation: Random Rotation Methods for High Dimensional Data with Batch Structure
contrastModel | Create transformed model matrix for contrast rotation
df_estimate | Defunct functions in package 'randRotation'
dim-method | Dimensions of an Object
dimnames-method | Dimnames of an Object
initBatchRandrot | Initialisation of a random rotation Object
initBatchRandrot-class | Initialised random rotation batch object
initBatchRandrot-method | Initialisation of a random rotation Object
initRandrot | Initialisation of a random rotation Object
initRandrot-class | Initialised random rotation class
initRandrot-method | Initialisation of a random rotation Object
initRandrotW-class | Initialised random rotation class
pFdr | Calculate resampling based p-values and FDRs
qqunif | Quantile-Quantile plot of data sample against uniform theoretical quantiles
randorth | Random orthogonal matrix
randpermut | Generate random permutation matrix for n samples
randrot | Random rotation of initialised object
randrot-method | Random rotation of initialised object
randRotation | randRotation: Random Rotation Methods for High Dimensional Data with Batch Structure
rotateStat | Generate data rotations and calculate statistics on it
rotateStat-class | Rotated object containing rotated and non-rotated statistics
show-method | Show an Object
weights-method | Extract model weights
X_decomp | Decomposition of the design matrix for random rotation generation