fa0a1090f13f38e99d1e626253e72c2e *DESCRIPTION
18592492ca6ecdef02c469b8be23767e *INDEX
6db5294bb197fb61aa661025f208c280 *Meta/Rd.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
3fb1766d9626f7eb27049adc2552aea0 *Meta/hsearch.rds
d296f5ac72f82257ca77c3db4b35440f *Meta/links.rds
3f1fb663d9ef1387d5cda0aa7e9e25c9 *Meta/nsInfo.rds
273264de15e2ede0a15049f3152b6a7e *Meta/package.rds
32cf7dbfaf093aa7d091398a6ed7217f *Meta/vignette.rds
26f55ef83799bdfaea68f953b19c496a *NAMESPACE
6747a781c4513731eafbaabeb7bc9378 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/nearBynding
4b62739f1ac76c5092c64c514b29500c *R/nearBynding.rdb
722facdfb30d750bf571b8c71c4b8885 *R/nearBynding.rdx
3dcb406a4b41bb8a1dfac918a214e296 *doc/index.html
af3dae63442385154ebcd02a49811a12 *doc/nearBynding.R
80c1debda56a3692ad5c95eebf6a39c9 *doc/nearBynding.Rmd
bc3999908dc78effe2e821018489adf7 *doc/nearBynding.pdf
ae6d7e4e4567a736e0ad90bf0511069f *extdata/Homo_sapiens.GRCh38.chr4&5.gtf
a1d705288a73dcc27ec57d42817afa82 *extdata/bulge_liftOver_chr4and5.dist
7da5930fb5148f0a236ee301e41c951a *extdata/chr4and5.bam
ac452d2dcc2e0cbdb3b6b1dc944b03a2 *extdata/chr4and5_3UTR.fa
133d71d3bb199112646fbddcfa265a23 *extdata/chr4and5_3UTR.out
6c14d3f68c7d0733bd6cbb64bb80da1f *extdata/chr4and5_sorted.bedGraph
cc2198191dfff58a31a6791f59374199 *extdata/exterior_liftOver_chr4and5.dist
c346782659cbe9dc0b8c609cd0694b3a *extdata/hairpin_liftOver_chr4and5.dist
82e36e01fa26480931039ac178ad8e83 *extdata/hg19.genome
75afe0a7c5316fe36c565fd9c77e8b27 *extdata/hg38.genome
8bfdfc78d880056374c42537d696575d *extdata/internal_liftOver_chr4and5.dist
6b069621425e1d115de8c825ecd86620 *extdata/multibranch_liftOver_chr4and5.dist
d7fa277e06a9bdc78f5bcff0af7149a9 *extdata/stem_liftOver_chr4and5.dist
91dab4ee9482c5fc7cf67427b2f4065e *extdata/transcript_list.Rda
b036d74873d4b78539543ef32fbdb704 *help/AnIndex
9f006e6c35b218177d55e92089b3e416 *help/CleanBAMtoBG.html
02c2c74fdcceb252a76d05fbeea1a3f3 *help/CleanBEDtoBG.html
8eff5715e528e74bc7883e5e81739ffc *help/ExtractTranscriptomeSequence.html
1377b14fc65c6a9bf5feea0c5b53b9a8 *help/GenomeMappingToChainFile.html
e05a60d83b21005ac05afade46e06f8a *help/aliases.rds
ad28daddec7ecd31a0bc915906212f92 *help/assessGrouping.html
258126ba9003bf94d7d8a48adb6afce9 *help/bindingContextDistance.html
19d3750f9bd24a2f4a6c626d2fb66d72 *help/bindingContextDistanceCapR.html
9360f8d638a7b751c2cf907029585fa4 *help/getChainChrSize.html
b9b276cb98f247404b424b2f7d0768fb *help/get_outfiles.html
038c49bbbbecd1283f77703aed4ebed7 *help/liftOverToExomicBG.html
ce4ca55d4d4b610c5220bc1e52233527 *help/nearBynding-package.html
ce4ca55d4d4b610c5220bc1e52233527 *help/nearBynding.html
4c67f3de9af71e702d1e8412224c47e6 *help/nearBynding.rdb
237ef32da9ffd5622043cac90dad7bf7 *help/nearBynding.rdx
8caaee20c6076c637bdb2abff68c82cf *help/paths.rds
98bef72fb0c449fcaf37352991f58ba9 *help/processCapRout.html
02690d79369301e2afd37f69f875815f *help/runCapR.html
c3ce85068e53717d221b0db6754032e5 *help/runStereogene.html
215a6c2b25f17b84b7dd94ab8a7d3f4d *help/runStereogeneOnCapR.html
2ec172ba8b0d8e13027bfd1731e3c195 *help/symmetryCapR.html
98817cb88cd2024467ec5f6df1a1168e *help/symmetryContext.html
ead88181b2b50f4bc06ef6f2126275f1 *help/visualizeCapRStereogene.html
67d583b658922b0f998dce072491bb93 *help/visualizeStereogene.html
ce871d2fd69a662cbd68dad1ceebc021 *help/write_config.html
46cc32e96671470cff27b70b9d23e4c8 *help/write_fasta.html
d6ce606a7d2c1434dd6194411950d51a *html/00Index.html
70c9153191862919d6c3fa2c8c29fa53 *html/CleanBAMtoBG.html
7a299a476fd992e6f07c8719b50aedc2 *html/CleanBEDtoBG.html
da9907e738f86d781d583c9dd593d96c *html/ExtractTranscriptomeSequence.html
e4600ced14646f765aa1ac4659cff402 *html/GenomeMappingToChainFile.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
4237c655f6d01f58b20d3c628b0bca91 *html/assessGrouping.html
3a19ee482c363000ddd85265efa59e89 *html/bindingContextDistance.html
f64d8cbf958b08efa60c4999d3b45feb *html/bindingContextDistanceCapR.html
e324bc7451e7a8f40094d44d83a41584 *html/getChainChrSize.html
179c436c2f38f8480403fc935bda8c34 *html/get_outfiles.html
ff4a84791d757a0ee533badd5aeb6426 *html/liftOverToExomicBG.html
7a9243a861a06584d8d18aafa3a57132 *html/nearBynding-package.html
cc12bc960df31511e658d621a82afff3 *html/processCapRout.html
ac647b201b0d0adc9d88fab7a9744d32 *html/runCapR.html
b98461479b26e06ea9cf30e53e754091 *html/runStereogene.html
a302ef2bbb31e42a7d7425c42a04525e *html/runStereogeneOnCapR.html
a52c796b87588913802c68c306637258 *html/symmetryCapR.html
c50d98fcb7c7b33907b693de8d0b9835 *html/symmetryContext.html
daaa79df173ea22e1c52de5b8c782516 *html/visualizeCapRStereogene.html
fc121b6c38d77c0790ab58685edc505c *html/visualizeStereogene.html
69515f6d9456612f019bd55ba20fc7cb *html/write_config.html
749a47118780cf67276d25be3db44696 *html/write_fasta.html
