mia-datasets {mia}

R Documentation

mia datasets

Description

These datasets are conversions of the phyloseq datasets GlobalPatterns enterotype, esophagus and soilrep.

dmn_se contains an example SummarizedExperiment derived from data in the DirichletMultinomal package. See ?calculateDMN for more details.

Usage

data(GlobalPatterns)

data(enterotype)

data(esophagus)

data(soilrep)

data(dmn_se)

Format

An object of class TreeSummarizedExperiment with 19216 rows and 26 columns.

An object of class TreeSummarizedExperiment with 553 rows and 280 columns.

An object of class TreeSummarizedExperiment with 58 rows and 3 columns.

An object of class TreeSummarizedExperiment with 16825 rows and 56 columns.

An object of class SummarizedExperiment with 130 rows and 278 columns.

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