1e4b0588b1cc60ae964905cb071b20f6 *CITATION
289df157ec76ef26b7719e299a20a3ba *DESCRIPTION
2a7cea561b9b02ef9bf035b103de2205 *INDEX
880c2b6744cdf162be1e57bd6118f994 *Meta/Rd.rds
144e57a42345991821a36056e4315b1e *Meta/data.rds
fb7fdc49e6f7592b59f7a8109e5c0689 *Meta/features.rds
7d8b63b55c765b8eb2f22bc966e4a22f *Meta/hsearch.rds
58235ff3a533bba83d357864a1ddf98a *Meta/links.rds
9074bb7d95fff9e288b3a770a47c1e54 *Meta/nsInfo.rds
f97b14629c641d3456c1364f18f7beb6 *Meta/package.rds
5faf496c66dd471e226dd40e981b88a3 *Meta/vignette.rds
9e366f5c9a64cbeeac5bbe91a5f1d1bf *NAMESPACE
ae4c1dd21e0ad41141736b677595a20c *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/metaseqR2
aa2a704a55b58fce964f95ea3a288874 *R/metaseqR2.rdb
d44c0b16a54cad9a9438593ecdd46e2e *R/metaseqR2.rdx
3a9b0e3986d8613f604be516db716bed *data/hg19pvalues.rda
c2601ab32e03c2f97b45f1377c57dd2b *data/mm9GeneData.rda
ea351657493f66a7e49deefc93fcbc2a *dna_loader.gif
4532094bc8547307342983e334d08dcc *doc/index.html
cb71226b7c3f51a2df192de39cbc19ac *doc/metaseqr2-annotation.R
00d3db8f1145ba22a7f8280e66ac0087 *doc/metaseqr2-annotation.Rmd
69b7afe84e46ae3e6183c0f6d23019d4 *doc/metaseqr2-annotation.html
f5567cce74d4c50dda084aa4eea21bf4 *doc/metaseqr2-statistics.R
7320709bece61e64dc3be4818438c746 *doc/metaseqr2-statistics.Rmd
230f313c217d29498d71d4ba5de0fbba *doc/metaseqr2-statistics.html
0570a742c0719f9c89fd542cd2a21f0e *dummy.gtf
f569da454f34cc9b5d1713956b8c81ad *extdata/C.bam
0f64c98b8f96fe0af0e39dd252cb7dc4 *extdata/T.bam
a7094bed2f2d541e29a1f6fecd2306c4 *extra/scvBiasCorrectionFits.rda
430c944b5713607c9f13886ee54331d1 *help/AnIndex
7a76d405284d1af709f41abf9d46ab90 *help/aliases.rds
84fa3dfed96970aae9a05ae7024158b7 *help/buildAnnotationDatabase.html
60dbfed318a4a386ddea8114a4cf5837 *help/buildCustomAnnotation.html
1991ba3dee3d3d89dc398d6c168d1d84 *help/combineBonferroni.html
e629fe97b9474b80a479fca9c48e2d4e *help/combineHarmonic.html
dc56182f955c221530c0082ae381ab2e *help/combineMaxp.html
6b92ca69d0516422619ecd561aad1bc0 *help/combineMinp.html
cd70e78a92646d5a3d02f9f48d9b2cc1 *help/combineSimes.html
d8a3fa1542b6f40316a0a18e92cec224 *help/combineWeight.html
4330ca705a3c78fd6b773c053242fc77 *help/createSignalTracks.html
143af2372e1f6093fe56ac85a09fb5fd *help/diagplotAvgFtd.html
1377157bab9149f3114f8399b4c6ade0 *help/diagplotBoxplot.html
6524bfc13864953392a4dcf4c880e09e *help/diagplotCor.html
749878c674b9cdee02438b282ad89de5 *help/diagplotDeHeatmap.html
082ea2cdc5270f534217d6b75b4eb04c *help/diagplotEdaseq.html
0119888178258d591776554f617d779c *help/diagplotFiltered.html
25f1300e1f836ab1851ec3ed9fd3a1b9 *help/diagplotFtd.html
17c963276c19f59deb72806d6bc780af *help/diagplotMds.html
23fbc672e14e56bb77ec096fcf68c4a0 *help/diagplotNoiseq.html
f9d75314039b76ebecf0517473c62cc1 *help/diagplotPairs.html
21512a6ae3d1e4c4d74de1d82b2e5104 *help/diagplotRoc.html
42189dfa7600ab601824940362e77034 *help/diagplotVenn.html
be1d09aedc3718bc40348e4232aa91b5 *help/diagplotVolcano.html
d0b49c9b885e90f6fe6086bcc3c312cc *help/downsampleCounts.html
9880030cd8975ddcd3d31354e6a79a1c *help/estimateAufcWeights.html
b2682f29a151d9d2b34aa0cad103e329 *help/estimateSimParams.html
8dd52e435ee1d37ede8c4414575113d2 *help/getAnnotation.html
d96174bee85c96761fcba7083698c5b5 *help/getDefaults.html
41f4f0f6ffee6cbedc6543c82dcce09c *help/getInstalledAnnotations.html
cbdd6be93e57160c0b1307f41ff92c1d *help/getWeights.html
8aff26e06a4e58b324f1c84571501681 *help/hg19pvalues.html
7b8ff8b0e8c09bae6e5be24f7b98ef40 *help/importCustomAnnotation.html
3fdfeb2162c27635a1964016a8cf2055 *help/libsizeListMm9.html
c0b72ee7387fb4d1da3e2a7572774fee *help/loadAnnotation.html
7205ab310b8805b5e1924846a0caea5a *help/makeSimDataSd.html
b49e0a1c5b4438d30bc062366b717f28 *help/makeSimDataTcc.html
d3dd8453b0c676099b33d9715c0dba92 *help/metaTest.html
f9d816d165dc4ec826c08ed08fe98d96 *help/metaseqR2.rdb
2815554cb29923df4a4325ae1d7b5c12 *help/metaseqR2.rdx
d1fa9a57a063b3c3512f425f74828577 *help/metaseqr2.html
cc67f916a493684d9a788a4bf1ea6963 *help/metaseqrPlot.html
080c2e0a953c6cc148be59a62da8a8f6 *help/mm9GeneCounts.html
1fb6722d289b7ba8bbb5c441560aff7f *help/normalizeAbsseq.html
1c487245a1130d427102d373514068ad *help/normalizeDeseq.html
e7e133d6a45afa745ce0f53db5d62d25 *help/normalizeDeseq2.html
f4a8c49ed298ac2c7680ad3ed6a4d674 *help/normalizeDss.html
ff520e0dc03afcf893bb78223aac9069 *help/normalizeEdaseq.html
3d4ff76aee8b4b1134f45c890462297a *help/normalizeEdger.html
ba1980fb8600dbbb2da3d6b37d12f5e9 *help/normalizeNbpseq.html
2380e4032e1b7101afb79dc9f30b15c9 *help/normalizeNoiseq.html
a77292316c90e744469e1f48c7b8f92f *help/paths.rds
82a25f5086dd99adafd00faa7ce34997 *help/read2count.html
46e0eb330dab2eb85adadcde955182d5 *help/readTargets.html
dd747d20432533e1c8ecc86b317e8915 *help/sampleListMm9.html
0b713391dc8254a134b56545e06bb819 *help/statAbsseq.html
fc88e78d91f9f83ddc11b48cac8e8575 *help/statBayseq.html
17838ac9ece253741e6eaace1c6eb1e5 *help/statDeseq.html
c25161029d0af8a5674fe04674e2ff3c *help/statDeseq2.html
84a0d880f16575e5a11e60c91c6cac9e *help/statDss.html
df59f50f112ce2ddc51c78f21d437f81 *help/statEdger.html
cfa2b29113a6cabee231cff271e01c37 *help/statLimma.html
4cd062873c8d819ccf643c283c88ed2f *help/statNbpseq.html
0d0e3ab96723c8c564ac28f1d3f77392 *help/statNoiseq.html
513402c40cc1a5cfe0bd33df9c8ac117 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
a8d84d3f1687b26380747fe17926d149 *html/buildAnnotationDatabase.html
93296f89127c4fad9fed8425e54c5498 *html/buildCustomAnnotation.html
2588870f391e0093c1f583f7af4d99a7 *html/combineBonferroni.html
4bbbc91522ee43efc1a71ee972aae0f6 *html/combineHarmonic.html
40225ca6de928b64236f4c8f63bf453f *html/combineMaxp.html
c2c4282d3397a66628f5ade7e9e6720c *html/combineMinp.html
70c1a95d6ee9c326cedfddfba62d7649 *html/combineSimes.html
dfb5a9c72672c9f330b86fa61750ed89 *html/combineWeight.html
4737930e86bebe552c362075a9109ba7 *html/createSignalTracks.html
a4c7c43f5d62a9bd140f463cca903291 *html/diagplotAvgFtd.html
b72c224bd60bdf1093c9e21e14917a0f *html/diagplotBoxplot.html
1d3897f712292f419c739b76e0520b9d *html/diagplotCor.html
f4a2fd7c73544f4090ff7253e0a58fef *html/diagplotDeHeatmap.html
efe3a8202cb8c44c28830879eaeeddb4 *html/diagplotEdaseq.html
1a0c08189adb06c1d224876a949ea539 *html/diagplotFiltered.html
bc21a93cec1f9d09e4660ce538a66eab *html/diagplotFtd.html
935ebdcdc4e05ecd11dec07fce16503d *html/diagplotMds.html
d5fc08cfa424daea02cfa2d3d239784f *html/diagplotNoiseq.html
69fe9e94f36120fd0749e1746a21ab22 *html/diagplotPairs.html
5971a54abfb17e5eee1408a254c8f661 *html/diagplotRoc.html
46b96456b18bfda8db8f19ef5a07d609 *html/diagplotVenn.html
21cf5aadf8a5b09cd9c3f73974f4645b *html/diagplotVolcano.html
74deedc90fb631e114fbc0af64e8b72a *html/downsampleCounts.html
7976e97692a8742bcb0746d4c2569a9a *html/estimateAufcWeights.html
485e88a54b5311c52f72b295a76e16a6 *html/estimateSimParams.html
80f719148fb06877012f7c0ec98e3435 *html/getAnnotation.html
28bbca799676ca02fc8a7c1af011b947 *html/getDefaults.html
1462372ede45bdf9bc01e768811606ec *html/getInstalledAnnotations.html
ce4e971ff3369c50e22221b646f2cf9a *html/getWeights.html
16b5cbbc4891a85192ab56f97e9df146 *html/hg19pvalues.html
efc9fe470f9743a2f4f90f1e157870a9 *html/importCustomAnnotation.html
e33e52bd728162d824a0fa5a34daba1f *html/libsizeListMm9.html
459cd05ede7eb6bec228a3a3361b9adb *html/loadAnnotation.html
74449df083ff9dd520e853c1599ea23e *html/makeSimDataSd.html
be08d7d30bb651d84ada8d8199b4d0e2 *html/makeSimDataTcc.html
507ba052c2dc9c71f4ababf7346d0cb8 *html/metaTest.html
f5ba447df1ed7027dc19dc72089ac13f *html/metaseqr2.html
4080f37c4e57262d560859beca42f476 *html/metaseqrPlot.html
240719b51a2048ace89dcf2a6819599f *html/mm9GeneCounts.html
c1c145c81ccf714e8caedcfc77450fc4 *html/normalizeAbsseq.html
6d7eb1450cae449a1010ce1a2363e118 *html/normalizeDeseq.html
e5ae8f6d1b953373f4b0d5a72304c582 *html/normalizeDeseq2.html
b0e024d7cc60e1198ca9ece25a30cac1 *html/normalizeDss.html
f0423c63598be8d8b94cce90dddd6dc8 *html/normalizeEdaseq.html
0139e715ece84f7bc4782d159a3141dd *html/normalizeEdger.html
75fe65468670a4fca459949cdf4cb705 *html/normalizeNbpseq.html
d130ec878bbd980c3281a648e68d55fc *html/normalizeNoiseq.html
828a42be0846e99692c58b9cdefd7d56 *html/read2count.html
faa1183aed09ce64f1f7fed024f2ce25 *html/readTargets.html
241bbdc81f5680d4d4378f4968996664 *html/sampleListMm9.html
ff5b579bbc4d8b2fd5a497e7b8e0fdcd *html/statAbsseq.html
2e7a8bc4e12a3ae9338f1457db99dfb0 *html/statBayseq.html
c927e4a515ecbebf24e47cd7fc8e1a59 *html/statDeseq.html
44fb5bb476c0ea372c6c8241dd4cb1b5 *html/statDeseq2.html
cd3f287ff9b2a0aac41034cda68d8ff4 *html/statDss.html
1a743fede212bbb650cc3083a9fb468d *html/statEdger.html
97fc8190a1686018b37681bd2988f413 *html/statLimma.html
6368e127d46b69b4c5da56646c95d10a *html/statNbpseq.html
c76cc029632d510bda491f170ff7875b *html/statNoiseq.html
94c6c7b2540c4b43e4d1e6fdc59c7d98 *libs/i386/metaseqR2.dll
847ee9bee2402feb363016178886639c *libs/x64/metaseqR2.dll
6d43d688c759ac7bda1ce4b38bfc7ae7 *metaseqr2_report.Rmd
57c1032238f4fc5a409d362a08b9b334 *script/README.txt
bb5f6ffc8d0636f55e219f651402c58f *unitTests/test_estimate_aufc_weights.R
ce70c12fa38005a55fdef329bb0f77c3 *unitTests/test_metaseqr.R
