readSpfabiaResult {fabia}

R Documentation

Factor Analysis for Bicluster Acquisition: Read Results of SpFabia

Description

readSpfabiaResult: C implementation of readSpfabiaResult.

Usage

readSpfabiaResult(X)

Arguments

X	the file prefix name of the result files of spfabia.

Details

Read the results of spfabia.

The code is implemented in C.

Value

object of the class Factorization. Containing L (loadings L), Z (factors Z), Psi (noise variance σ), lapla (variational parameter), avini (the information which the factor z_{ij} contains about x_j averaged over j) xavini (the information which the factor z_{j} contains about x_j) ini (for each j the information which the factor z_{ij} contains about x_j).

Author(s)

Sepp Hochreiter

References

S. Hochreiter et al., ‘FABIA: Factor Analysis for Bicluster Acquisition’, Bioinformatics 26(12):1520-1527, 2010. http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btq227

See Also

fabia, fabias, fabiap, spfabia, readSamplesSpfabia, readSpfabiaResult, fabi, fabiasp, mfsc, nmfdiv, nmfeu, nmfsc, extractPlot, extractBic, plotBicluster, Factorization, projFuncPos, projFunc, estimateMode, makeFabiaData, makeFabiaDataBlocks, makeFabiaDataPos, makeFabiaDataBlocksPos, matrixImagePlot, fabiaDemo, fabiaVersion

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