e1636b6c00c71cd5994c5936776b5a64 *CITATION
010255b72da253a5ca55b0c00d5ba665 *DESCRIPTION
3ab9cae3fb9a46ed54c4df87a67fc172 *INDEX
52a5b60ffba2d0954ebf736f0d92b01c *LICENSE
1a2bb5cbb088556069963380a2b68b98 *Meta/Rd.rds
9b252174f7720c0b2a9f811ea9c34688 *Meta/data.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
b853c40fd837d147e9d37381a4760136 *Meta/hsearch.rds
ceb99547ebff5fb60649598bf1cdddf1 *Meta/links.rds
3ee1d9f11ed31a96dac613e85db6ffd6 *Meta/nsInfo.rds
7a7363ce2a1500bf34972312c863a7a0 *Meta/package.rds
0498fa4c1869fcc25e94c7e8ec3df395 *Meta/vignette.rds
e84a5e4f39d8cf6701ad1281608616ad *NAMESPACE
d6c68f1fe41ced6e98a766a3757313da *R/deltaCaptureC
2b5720f0bf496aa9e61b311424908395 *R/deltaCaptureC.rdb
38692fdedd31e75b108bdc9e437c3fbb *R/deltaCaptureC.rdx
246648845b3f07f2b92e570ffd6fa78b *data/Rdata.rdb
84c1e0b637dbd89ffa11da295bc64b2d *data/Rdata.rds
d87eb15ef5255209ee7e88a6f1e9b54a *data/Rdata.rdx
b268f2747250958243f4c15740bf2f11 *doc/deltaCaptureC.R
380f1cc60d823f2e8697eceb1df345cb *doc/deltaCaptureC.Rmd
fd3a7efb0886c72aeb6c7a99a7a23bd2 *doc/deltaCaptureC.html
8f03ecf3654918d6705df7f5bd58d9b5 *doc/index.html
7de07889beafa6679aa797a299a54d75 *help/AnIndex
e67dd45cdbd3f214370348b4e5710fa4 *help/aliases.rds
873794422b46b7a9b36d82d0d43b1826 *help/bigBinSize.html
5904eaa8b2752c56d5109564183c70d2 *help/binSummarizedExperiment.html
65455f04587b1c070c2574fe20a961d3 *help/binnedDeltaPlot.html
576a8b73eb5a8fd7fdec46377f7468ad *help/binnedDeltaSE.html
218027d90fc1cffd6b47e17cb7170cc3 *help/binnedSummarizedExperiment.html
d6886fe6ce2f127258d7cf07735a6558 *help/deltaCaptureC.rdb
6b20bf3f1f19e421e219662f88672468 *help/deltaCaptureC.rdx
8d12a09cf57746d3a33a28fd4f674100 *help/deltaSE.html
c176aec677ee04bd72bdd46c6995d0f7 *help/dot-getRunsAndTotals.html
4157ac1fc54107226ec9af534e5b57a1 *help/downshiftDFtoMatrix.html
4675138fe4d5782915053ef607220d91 *help/generatePermutation.html
5e6e68e42d14ff3a9bee0a20d0321c51 *help/getDeltaSE.html
6f8ea07eafeb9b5465b9c11402fe32b6 *help/getLopsidedness.html
33da04bea3c742715a5de1b1e6db9258 *help/getMeanNormalizedCountsSE.html
4d27d64afe2d714fa1a9aff0a726a521 *help/getNormalizedCountsSE.html
f4da344369ba1d3f7227d56e5d130e2f *help/getOverlapWeights.html
db2d01551b82459657f15c4f1f4c6d77 *help/getPValueCutoff.html
c37946b7a68398473ffb88f8eabae0da *help/getRunAndLopsidednessStatistics.html
2bc7ea6bd72448d6151a667ac8074a65 *help/getRunStatistics.html
c2677082e42dd96ecdca51f268e8fa8a *help/getRunStatisticsDist.html
1b139409710c38db016b3065e08566a8 *help/getRunTotals.html
d8d4209059e044094ad90f69d3e571e0 *help/getSignificantRegions.html
d12ac16ee3b1e111fd89e6342ebdd959 *help/getSizeFactorsDF.html
0ac4af7b4c64fd7d6d3f0ff1c529dae7 *help/getSizeFactorsSE.html
71ff62c614bb8ea1f7a9871b3924dd42 *help/miniDeltaSE.html
de0f262aeef03721f22689add47aaa86 *help/miniSE.html
f408afa1fb627d5aaccd3804aa5064fd *help/miniSEDF.html
89582024e60f588c8c121f102f2be2ac *help/numPermutations.html
e84c842fe7a8c111005d8be5df9b5d58 *help/pValue.html
fa788025a62a51c42afe2128b4c65824 *help/paths.rds
d2388cb70fac54c81de35406f5303dfd *help/plotSignificantRegions.html
cd2b5459e20889d7d5d5483b76dbaf93 *help/plotTitle.html
d1ab3ebeefd709a5e239bc7dfad837e9 *help/rebinToMultiple.html
a2388ebae8d281b5d10b305c53d41f4c *help/regionOfInterest.html
07b00833de1adc32169c5ba5130cdd6f *help/significanceType.html
7c0f7109766e5b3f5024ebddcfd689df *help/significantRegions.html
63db6684156911a1bab752b0964cce21 *help/significantRegionsPlot.html
c9ea95b01f23677a0f44388f163f2380 *help/smallBinSize.html
7cd5636d022a88d98262e1a8bd6e2957 *help/smallBins.html
1acc2121a86f4bcf055266fa6db48ad1 *help/smallSetOfSmallBins.html
fa4729d6ae5ab0a9e3c69341b88a16fb *help/smallerDeltaSE.html
5d5d8108a2401c783a57c9608630b8ca *help/viewpointRegion.html
5d7b6c9094be4881da8cc4d5ebb3d5c8 *help/weightsExampleBins.html
99a033f015f9e2ee9a4bd2032aabf198 *help/weightsExampleGr.html
e0224302d295958c737245d3c7e0764d *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
e9e0759955ad821efa863da412c3e927 *html/bigBinSize.html
ee5ede63693b9d42360343436eecd693 *html/binSummarizedExperiment.html
97d2943696ca732391f2750d0b026c9b *html/binnedDeltaPlot.html
8a2275c82bebd79357e20a61bc58a6b5 *html/binnedDeltaSE.html
011c94535d2a340f45899e1532300d6b *html/binnedSummarizedExperiment.html
0a8d40f0d49de8a1c1e6e32efe231d16 *html/deltaSE.html
199e62c86fe1f8f1349621cac59278fe *html/dot-getRunsAndTotals.html
712d046355d6a7599b2bec86f106ccda *html/downshiftDFtoMatrix.html
9f506e21fbec9d07ffce181d8f7b41de *html/generatePermutation.html
c4a11f7489ed9b9ae3785edf6b5e53d4 *html/getDeltaSE.html
3322cdb46c7ef61fafbf72c35cd229a3 *html/getLopsidedness.html
06fc78ca6fa409fa03d05ea8ee5874b9 *html/getMeanNormalizedCountsSE.html
917903ce1c7f58acb5682f6623e40066 *html/getNormalizedCountsSE.html
32fa63b2e386f03e0738ad479eca3019 *html/getOverlapWeights.html
c7310647754973f19e3dc63d70a538a7 *html/getPValueCutoff.html
aca37d80e45dc7e54038183b1e7cc709 *html/getRunAndLopsidednessStatistics.html
3f88a25e1ee2ca68fb98d6e8899ebded *html/getRunStatistics.html
7011ed7966c180303063bb115bb14d34 *html/getRunStatisticsDist.html
24e1cfb76e6a35519ee63d0bc0591914 *html/getRunTotals.html
d596277a9ccbad0a438cc2dfaba9bddc *html/getSignificantRegions.html
bae8044655cbefb984773984c23b82a7 *html/getSizeFactorsDF.html
702a256c813667e5522dd757f1e6d109 *html/getSizeFactorsSE.html
f97700a6446ebf8ef8c8cedc716f30f4 *html/miniDeltaSE.html
cc28286f0c28422f016c8ff4eb6a3ba4 *html/miniSE.html
a231005faae96dacd700239e30df4abc *html/miniSEDF.html
6e34503465550624d3d818a6d07241c9 *html/numPermutations.html
845607cfe6af4a70213389f939aee0ee *html/pValue.html
685ddb0149c7a55b66b083583f162194 *html/plotSignificantRegions.html
016e54360eb7424b14e6c88ce2977114 *html/plotTitle.html
f1454c03b5f938388e4080fba03630b0 *html/rebinToMultiple.html
ff23dd0a7a1f87bc431782317735a021 *html/regionOfInterest.html
c1e3297cef1dabd618548c90bbd1a182 *html/significanceType.html
2a31f56238628853ad21bf72299f277e *html/significantRegions.html
4c4c8a8581359c88357e6991a66da69e *html/significantRegionsPlot.html
6ab3263ab16cc6ecfa028c7baa310ed2 *html/smallBinSize.html
3cfdcb5fa3542250f51b41bb89b7e8f8 *html/smallBins.html
87b9be7a564ce03fc560c5f9d6ba096c *html/smallSetOfSmallBins.html
19c2ec7107cada6c672741169f5400db *html/smallerDeltaSE.html
e6fc53544b10b5522b022ae76e83db45 *html/viewpointRegion.html
59a887aed730fe0fc8e262ba02139d46 *html/weightsExampleBins.html
866d7d0407daea85710159e1bda50c1d *html/weightsExampleGr.html
