CnvGSAOutput-class {cnvGSA}

R Documentation

Class "CnvGSAOutput"

Description

Container class for the output structures produced by the main function (i.e. cnvGSAlogRegTest()).

Slots

phData.ls:

Object of class "list" containing phenotype and covariate data.

res.ls:

Object of class "list" containing burden analysis results for gene-sets.

gsTables.ls:

Object of class "list" containing the gene-set tables.

gsData.ls:

Object of class "list" containing gene-set data.

Methods

gsTables.ls

signature(obj = "CnvGSAOutput"): Gets gsTables.ls.

res.ls

signature(obj = "CnvGSAOutput"): Gets res.ls.

phData.ls

signature(obj = "CnvGSAOutput"): Gets phData.ls.

gsData.ls

signature(obj = "CnvGSAOutput"): Gets gsData.ls.

Author(s)

Joseph Lugo joseph.r.lugo@gmail.com

Examples

## See vignette for full details and worked example

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