Class for handling a Compound database in SQLite format.

Description

This is the connector class for a Compound database.

Super classes

biodb::BiodbConnBase -> biodb::BiodbConn -> biodb::SqliteConn -> CompSqliteConn

Methods

Public methods

• CompSqliteConn$clone()

Method clone()

The objects of this class are cloneable with this method.

Usage

CompSqliteConn$clone(deep = FALSE)

Arguments

See Also

Super class SqliteConn.

Examples

# Create an instance with default settings:
mybiodb <- biodb::newInst()

# Get a connector:
chebi_file <- system.file("extdata", "chebi_extract.sqlite", package="biodb")
conn <- mybiodb$getFactory()$createConn('comp.sqlite', url=chebi_file)

# Get an entry
e <- conn$getEntry('1018')

# Terminate instance.
mybiodb$terminate()