sumexp2mae {autonomics}

R Documentation

Create MultiAssayExperiment from SummarizedExperiment list

Description

Create MultiAssayExperiment from SummarizedExperiment list

Usage

sumexp2mae(experiments)

Arguments

experiments

named list of SummarizedExperiments

Value

MultiAssayExperiment

Examples

require(magrittr)
somascanfile  <- download_data('atkin18.somascan.adat')
metabolonfile <- download_data('atkin18.metabolon.xlsx')
somascan <- read_somascan(somascanfile,   plot=FALSE)
metabolon<- read_metabolon(metabolonfile, plot=FALSE)
svars(somascan)  %<>% stringi::stri_replace_first_fixed(
                        'SampleGroup', 'subgroup')
svars(metabolon) %<>% stringi::stri_replace_first_fixed(
                        'Group',       'subgroup')
metabolon$replicate <- NULL
object   <- sumexp2mae(list(somascan=somascan, metabolon=metabolon))

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