merge_sdata {autonomics}

R Documentation

Merge sample/feature data

Description

Merge sample/feature data

Usage

merge_sdata(
  object,
  dt,
  by.x = "sample_id",
  by.y = names(dt)[1],
  verbose = TRUE
)

merge_fdata(
  object,
  dt,
  by.x = "feature_id",
  by.y = names(dt)[1],
  verbose = TRUE
)

Arguments

object	SummarizedExperiment
dt	data.frame, data.table, DataFrame
by.x	object mergevar
by.y	df mergevar
verbose	TRUE/FALSE

Value

SummarizedExperiment

Examples

require(magrittr)
file <- download_data('halama18.metabolon.xlsx')
object <- read_metabolon(file, plot=FALSE)
object %<>% merge_sdata( data.frame(sample_id = object$sample_id,
                                    number = seq_along(object$sample_id)))
head(sdata(object))

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