alphabetQuality {amplican} | R Documentation

## This filters out sequences which have nonstandard nucleotides.

### Description

This filters out sequences which have nonstandard nucleotides.

### Usage

    alphabetQuality(reads, batch_size = 1e+07)

### Arguments

`reads` | (ShortRead object) Loaded reads from fastq.
`batch_size` | (numeric) How many reads to process at a time.

### Value

(boolean) Logical vector with the valid rows as TRUE.

[Package amplican version 1.16.0 Index]