defGR {amplican} | R Documentation

## Helper to construct GRanges with additional metadata columns.

### Description

Helper to construct GRanges with additional metadata columns.

### Usage

    defGR(
      x,
      ID,
      score,
      strand_info = "+",
      type = "deletion",
      originally = "",
      replacement = ""
    )

### Arguments

`x` | (`IRanges`) names(x) indicating read_id
`ID` | (string)
`score` | (numeric) scores from the alignments
`strand_info` | (string) Either '+', '-'
`type` | (string)
`originally` | (string) Base pairs on the amplicon.
`replacement` | (string) Base pairs on the read.

### Value

(`GRanges`) Object with meta-data

[Package amplican version 1.16.0 Index]