objects {XNAString}

R Documentation

Objects getter method for XNAStringSet class

Description

Getter methods enable extraction of single slots from XNAStringSet objects. E.g. objects method extracts objects slot from XNAStringSet object. It is a list of XNAString objects.

Usage

objects(x, ...)

## S4 method for signature 'XNAStringSet'
objects(x)

Arguments

x	XNAStringSet object
...	optional arguments to generic function to support additional methods

Value

list of XNAString objects

Examples

my_dic <- data.table::data.table(type = c(rep('base',3),
                                          rep('sugar',2),
                                          rep('backbone',3)),
                                symbol = c('G', 'E', 'A', 'F', 
                                           'O', 'S', 'B', 'X'))
obj2 <- XNAString(name = 'b',
                  base = 'GGE',
                  sugar = 'FFO',
                  dictionary = my_dic)
obj3 <- XNAString(name = 'b',
                  base = c('GGE','EEE'),
                  sugar = c('FFO', 'OOO'),
                  dictionary = my_dic)
XNAStringSetObj <- XNAStringSet(objects=list(obj2, obj3))
objects(XNAStringSetObj)

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