# Generated by roxygen2: do not edit by hand

export(aggSE)
export(castSE)
export(crossHm)
export(flattenPB)
export(getBreaks)
export(log2FC)
export(meltSE)
export(mergeSEs)
export(resetAllSEtoolsOptions)
export(scale2)
export(se2xls)
export(sechm)
export(sehm)
export(sortRows)
export(svacor)
import(BiocParallel)
import(ComplexHeatmap)
import(Matrix)
import(SummarizedExperiment)
importFrom(ComplexHeatmap,Legend)
importFrom(ComplexHeatmap,packLegend)
importFrom(DESeq2,DESeqDataSetFromMatrix)
importFrom(DESeq2,estimateSizeFactors)
importFrom(DESeq2,varianceStabilizingTransformation)
importFrom(DESeq2,vst)
importFrom(S4Vectors,"metadata<-")
importFrom(S4Vectors,SimpleList)
importFrom(S4Vectors,metadata)
importFrom(SummarizedExperiment,colData)
importFrom(SummarizedExperiment,rowData)
importFrom(circlize,colorRamp2)
importFrom(data.table,data.table)
importFrom(data.table,rbindlist)
importFrom(edgeR,DGEList)
importFrom(edgeR,calcNormFactors)
importFrom(edgeR,cpm)
importFrom(grDevices,colorRampPalette)
importFrom(grid,gpar)
importFrom(methods,is)
importFrom(openxlsx,write.xlsx)
importFrom(randomcoloR,distinctColorPalette)
importFrom(seriation,get_order)
importFrom(seriation,seriate)
importFrom(stats,aggregate)
importFrom(stats,dist)
importFrom(stats,median)
importFrom(stats,model.matrix)
importFrom(stats,quantile)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(sva,sva)
