Package: SEtools
Type: Package
Title: SEtools: tools for working with SummarizedExperiment
Version: 1.8.0
Depends: R (>= 4.0)
Authors@R: person("Pierre-Luc", "Germain", email="pierre-luc.germain@hest.ethz.ch", role=c("cre","aut"), comment=c(ORCID="0000-0003-3418-4218"))
Description: This includes a set of tools for working with the SummarizedExperiment class, including merging, melting, aggregation and plotting functions. In particular, SEtools offers a simple interface for plotting complex heatmaps from SE objects.
Imports: S4Vectors, SummarizedExperiment, data.table, seriation,
        ComplexHeatmap, circlize, methods, BiocParallel, randomcoloR,
        edgeR, openxlsx, sva, stats, DESeq2, Matrix, grid
Suggests: BiocStyle, knitr, rmarkdown, ggplot2, pheatmap
biocViews: GeneExpression, Visualization
VignetteBuilder: knitr
License: GPL
Encoding: UTF-8
RoxygenNote: 7.1.1
BugReports: https://github.com/plger/SEtools
git_url: https://git.bioconductor.org/packages/SEtools
git_branch: RELEASE_3_14
git_last_commit: 30a597c
git_last_commit_date: 2021-10-26
Date/Publication: 2021-10-26
NeedsCompilation: no
Packaged: 2021-10-27 04:00:35 UTC; biocbuild
Author: Pierre-Luc Germain [cre, aut] (<https://orcid.org/0000-0003-3418-4218>)
Maintainer: Pierre-Luc Germain <pierre-luc.germain@hest.ethz.ch>
Built: R 4.1.1; ; 2021-10-27 13:25:06 UTC; windows
