0bba04b9d904529bdcf5da9acae88aec *CITATION
3d3398cc25a2f6a85a73c6a19069ff82 *DESCRIPTION
009f2e75497a0d9c4df86e252f601e89 *INDEX
85b042d501d860c1926c7a69e644c767 *LICENSE
36f73fdfd75a11d68e4c13e3679a15b1 *Meta/Rd.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
8a21ce8e616220cec2ba6090d18e5a64 *Meta/hsearch.rds
7e60dce233f193f907c749aadfcee713 *Meta/links.rds
fea0a50f3f59dc452a7d1748659ae59f *Meta/nsInfo.rds
b85d66fd2ca5ee584739de545445f8f2 *Meta/package.rds
e0709783dcd6acfc0b259e58d138c484 *Meta/vignette.rds
44b46d775014f6d655607d58672f41bf *NAMESPACE
c54f9949c3f0f72ec40642aeb8b0daba *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/ReactomeGSA
2af8a493e12337d32338d6d9c5f6154f *R/ReactomeGSA.rdb
0d8283fd98dfcc03ba4bf3c4f2ffd819 *R/ReactomeGSA.rdx
d355b1b5402857bc00b7b810ee56ae87 *doc/analysing-scRNAseq.R
c12327fcc583fe51ebfd4c5a19e37d79 *doc/analysing-scRNAseq.Rmd
fa918768e146f6ac55bab31387bc792a *doc/analysing-scRNAseq.html
954647074ea6aeb9ee30971b00f4404c *doc/index.html
d416647d89ce9f6808d605115fec67cf *doc/using-reactomegsa.R
3c1e85c3604fc6041a1a00a018a5937f *doc/using-reactomegsa.Rmd
b8073390be39541b02d0f21e9f567dc9 *doc/using-reactomegsa.html
5f7f10992aa11ac6a904ebf79f868d5c *help/AnIndex
89a7209cdc3abe53a66dc362f2a50eee *help/ReactomeAnalysisRequest.html
9a361c5d6df5de850f5b7825a928833a *help/ReactomeAnalysisResult-class.html
9a361c5d6df5de850f5b7825a928833a *help/ReactomeAnalysisResult.html
8f0ec790005994c1cfe04ce8920e15fe *help/ReactomeGSA.rdb
ef6b47dbcea573063c516da0dd5bfb82 *help/ReactomeGSA.rdx
1e0d05c0bbd32bb03e610e1927af2483 *help/add_dataset+2CReactomeAnalysisRequest+2CDGEList-method.html
79d4ec1504ba8c85eed4ed1bbd92de79 *help/add_dataset+2CReactomeAnalysisRequest+2CEList-method.html
87319a146ed25f9bb98630da2766cf64 *help/add_dataset+2CReactomeAnalysisRequest+2CExpressionSet-method.html
01a6fa09239315b8b3cfb18a16669e84 *help/add_dataset+2CReactomeAnalysisRequest+2Cdata.frame-method.html
bc1c5058d8bf13861c41456785dce5a9 *help/add_dataset+2CReactomeAnalysisRequest+2Cmatrix-method.html
1e0d05c0bbd32bb03e610e1927af2483 *help/add_dataset-ReactomeAnalysisRequest-DGEList-method.html
79d4ec1504ba8c85eed4ed1bbd92de79 *help/add_dataset-ReactomeAnalysisRequest-EList-method.html
87319a146ed25f9bb98630da2766cf64 *help/add_dataset-ReactomeAnalysisRequest-ExpressionSet-method.html
01a6fa09239315b8b3cfb18a16669e84 *help/add_dataset-ReactomeAnalysisRequest-data.frame-method.html
bc1c5058d8bf13861c41456785dce5a9 *help/add_dataset-ReactomeAnalysisRequest-matrix-method.html
0d85b192bbde0d748757c38327a82143 *help/add_dataset.html
f5a1a74847fbd2a311b152c03022a530 *help/aliases.rds
8726ae5784c552503a4c83054d01e378 *help/analyse_sc_clusters+2CSeurat-method.html
ffb999b933c8fd7ff1edc7a3134d765b *help/analyse_sc_clusters+2CSingleCellExperiment-method.html
8726ae5784c552503a4c83054d01e378 *help/analyse_sc_clusters-Seurat-method.html
ffb999b933c8fd7ff1edc7a3134d765b *help/analyse_sc_clusters-SingleCellExperiment-method.html
08fa255ded083192afe1123e97a87bf7 *help/analyse_sc_clusters.html
a8ba4de4c07e88f8dac811f92b760f22 *help/break_names.html
9fdeeaafe349804c212a537ffe521339 *help/checkRequestValidity.html
87a783843a2856345816e7a026a9ca83 *help/check_reactome_url.html
3262f1f65af34812fa90d6403365bbf2 *help/convert_reactome_result.html
06c18b4bd87c97de47ced94c340690fd *help/data_frame_as_string.html
58643e02c0af412609aa351223fbb8a3 *help/get_fc_for_dataset.html
fd8677c13fe40602d65cf2d808151b39 *help/get_is_sig_dataset.html
3e539ad78da01ce032f323b633efb290 *help/get_reactome_analysis_result.html
9ac39299792353ebe14236e793db1dfd *help/get_reactome_analysis_status.html
874f2b3c2bbff70e9249c69e94fceb4e *help/get_reactome_data_types.html
9646bec55a425413b71c6d8b18bf86b0 *help/get_reactome_methods.html
a0a4a7bae40e207b82e3c320429d81d0 *help/get_result+2CReactomeAnalysisResult-method.html
a0a4a7bae40e207b82e3c320429d81d0 *help/get_result-ReactomeAnalysisResult-method.html
acd595e0e5cccf45724b836b42b917c0 *help/get_result.html
3b622eca0d6f2ec1e8fe810f0ffaa464 *help/is_gsva_result.html
703cc0248880a13fd764ae1171a0603d *help/names+2CReactomeAnalysisResult-method.html
703cc0248880a13fd764ae1171a0603d *help/names-ReactomeAnalysisResult-method.html
cec7c155f2738459e4f0edd7aa307fff *help/open_reactome+2CReactomeAnalysisResult-method.html
cec7c155f2738459e4f0edd7aa307fff *help/open_reactome-ReactomeAnalysisResult-method.html
3b067d4908f864178075f9e75eb1d30a *help/open_reactome.html
1c0ca3c2841e2716d3096040b39b0c75 *help/paths.rds
a11cb0cadbddfd12b50b2f3bcf54916d *help/pathways+2CReactomeAnalysisResult-method.html
a11cb0cadbddfd12b50b2f3bcf54916d *help/pathways-ReactomeAnalysisResult-method.html
23e8bd1d3eaed2365d626f0638c727b3 *help/pathways.html
80657dd1d4ac24af946eafb4f9dabb0c *help/perform_reactome_analysis.html
7f813213497943230e46e9f0866205a0 *help/plot_correlations+2CReactomeAnalysisResult-method.html
7f813213497943230e46e9f0866205a0 *help/plot_correlations-ReactomeAnalysisResult-method.html
9f400daf9229df79fa4226b7fddf170f *help/plot_correlations.html
fc0c6bff8d1519bf7376a870b306c97d *help/plot_gsva_heatmap+2CReactomeAnalysisResult-method.html
fc0c6bff8d1519bf7376a870b306c97d *help/plot_gsva_heatmap-ReactomeAnalysisResult-method.html
79779f0b4e3631e97a409c16583ef735 *help/plot_gsva_heatmap.html
f9900abfb7d675e6b09c1251c2dd0027 *help/plot_gsva_pathway+2CReactomeAnalysisResult-method.html
f9900abfb7d675e6b09c1251c2dd0027 *help/plot_gsva_pathway-ReactomeAnalysisResult-method.html
48d097b67d7bd16435d4849afbe67d94 *help/plot_gsva_pathway.html
a3349796868eed91c404be640d0115c2 *help/plot_gsva_pca+2CReactomeAnalysisResult-method.html
a3349796868eed91c404be640d0115c2 *help/plot_gsva_pca-ReactomeAnalysisResult-method.html
3c2d0cc1eb3469460f0bb5291aac91b2 *help/plot_gsva_pca.html
123de6c46b58aad3b076db509b19e50a *help/plot_heatmap+2CReactomeAnalysisResult-method.html
123de6c46b58aad3b076db509b19e50a *help/plot_heatmap-ReactomeAnalysisResult-method.html
5c7173cde0410b00b88b8c69231764ed *help/plot_heatmap.html
ea2ddd54a4681c079ded2e1ff0160ade *help/plot_volcano+2CReactomeAnalysisResult-method.html
ea2ddd54a4681c079ded2e1ff0160ade *help/plot_volcano-ReactomeAnalysisResult-method.html
23554a0d2a9e9d08fe09a67dd78ba386 *help/plot_volcano.html
2cb69a24f5c123f6a008903e949d2886 *help/print+2CReactomeAnalysisRequest-method.html
6124700e4e4d1ef9dbe4d482e001625f *help/print+2CReactomeAnalysisResult-method.html
2cb69a24f5c123f6a008903e949d2886 *help/print-ReactomeAnalysisRequest-method.html
6124700e4e4d1ef9dbe4d482e001625f *help/print-ReactomeAnalysisResult-method.html
f73d375e4e236a904e6e0e1b4d832610 *help/reactome_links+2CReactomeAnalysisResult-method.html
f73d375e4e236a904e6e0e1b4d832610 *help/reactome_links-ReactomeAnalysisResult-method.html
d4a9c3678622ba4064326590271e77e1 *help/reactome_links.html
bfb123f0f6ae29aa70a5f2f399a65799 *help/remove_dataset+2CReactomeAnalysisRequest-method.html
bfb123f0f6ae29aa70a5f2f399a65799 *help/remove_dataset-ReactomeAnalysisRequest-method.html
78008720344247c93a50ebfe37b20451 *help/remove_dataset.html
746d90df6a15cc318c6e0d10f4639439 *help/result_types+2CReactomeAnalysisResult-method.html
746d90df6a15cc318c6e0d10f4639439 *help/result_types-ReactomeAnalysisResult-method.html
f7e9d0930ab8cf1a436c9f2680e0d950 *help/result_types.html
3ca1f52dbd252b3a883af02e7fc3282e *help/set_method+2CReactomeAnalysisRequest-method.html
3ca1f52dbd252b3a883af02e7fc3282e *help/set_method-ReactomeAnalysisRequest-method.html
3ee5cc68e7227b0cf53d9e8dd025f317 *help/set_method.html
1798b132dd56f3cb01a051f1a2431fd1 *help/set_parameters+2CReactomeAnalysisRequest-method.html
1798b132dd56f3cb01a051f1a2431fd1 *help/set_parameters-ReactomeAnalysisRequest-method.html
18dccc4b45d8ea061a176fc7c2d0396f *help/set_parameters.html
1e955a1480d522443a670e4b4ea0812e *help/show+2CReactomeAnalysisRequest-method.html
14028d146faa254e89f23467908af116 *help/show+2CReactomeAnalysisResult-method.html
1e955a1480d522443a670e4b4ea0812e *help/show-ReactomeAnalysisRequest-method.html
14028d146faa254e89f23467908af116 *help/show-ReactomeAnalysisResult-method.html
c5868cfaf40787653b7c270044b77087 *help/start_reactome_analysis.html
2ede63e5b3920369401f9ee9ac9b76bc *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
9ef6f24aa2178cdb8740480918e6b60f *html/ReactomeAnalysisRequest.html
d47a8926fa17fa1bbefbf377eab4dfe6 *html/ReactomeAnalysisResult-class.html
5b0f2bd0dbbec147632b48fef4f9b364 *html/add_dataset-ReactomeAnalysisRequest-DGEList-method.html
502125ba410b5fa113b50ce2bd5b182e *html/add_dataset-ReactomeAnalysisRequest-EList-method.html
7ea288f3db5a49b88690f1ec1309de67 *html/add_dataset-ReactomeAnalysisRequest-ExpressionSet-method.html
0c3cd6b3db4227166b54da6b106580f8 *html/add_dataset-ReactomeAnalysisRequest-data.frame-method.html
40681d950b458c531b3dac86d3bbf579 *html/add_dataset-ReactomeAnalysisRequest-matrix-method.html
c55a7902e350758b1f9f111c912bc585 *html/add_dataset.html
7ed71fd5da3743dc527553fadeac51ef *html/analyse_sc_clusters-Seurat-method.html
523d50274cd384807d4482498985aaff *html/analyse_sc_clusters-SingleCellExperiment-method.html
4d0aa37b350c675905b80424bd016ecf *html/analyse_sc_clusters.html
5692c72079eb57902cd1f3654acab1f3 *html/break_names.html
92ab377fb6f7b8c5c33c783b8178945b *html/checkRequestValidity.html
1b590102f3e94269ca67990513d361cb *html/check_reactome_url.html
433756c201b02d5fbd1ebc52cdff778e *html/convert_reactome_result.html
730d58c36a8d1afbaa98ced9b7bc84b1 *html/data_frame_as_string.html
a1d780eda232b6e432d9e5925245f281 *html/get_fc_for_dataset.html
8f2133f69d747e7483708a2ce9b992e1 *html/get_is_sig_dataset.html
658aa4d8bf6cf93e5308abc935280128 *html/get_reactome_analysis_result.html
f603b2ba897483a2ecb3e788236d4028 *html/get_reactome_analysis_status.html
32981f30026eef54ff0eb99f141c8901 *html/get_reactome_data_types.html
d49217aac7954dc506f6059c76d463bf *html/get_reactome_methods.html
0a08d2227094ae59018729cdbc14a376 *html/get_result-ReactomeAnalysisResult-method.html
c19a30aa0fa23fd3636b6986e1ab5eb6 *html/get_result.html
9d248544f5ffa4f6f4e65c6f3f46bd61 *html/is_gsva_result.html
15b631ffe6928e1cd4cdf26f3e4708ce *html/names-ReactomeAnalysisResult-method.html
9533c2b871ec1275d8e25971df2ea5ac *html/open_reactome-ReactomeAnalysisResult-method.html
2c839519770b3b54c84704751af24d33 *html/open_reactome.html
6c030c9c557d9d295cb9315ec9c99ad2 *html/pathways-ReactomeAnalysisResult-method.html
74bcef62d670d7accdf2921c118c7cd7 *html/pathways.html
108e3eccf45da93b90cf26098c12160b *html/perform_reactome_analysis.html
b234fd360a2503accc1c5c8e0abe836a *html/plot_correlations-ReactomeAnalysisResult-method.html
9d65620e5222336d0225757c95867513 *html/plot_correlations.html
a348f0de00d89fef83278d18e5515fc4 *html/plot_gsva_heatmap-ReactomeAnalysisResult-method.html
205e703d182a85fc9b56a0c1e81dfc33 *html/plot_gsva_heatmap.html
3035f9a41b4549557b9a3bf9770b674a *html/plot_gsva_pathway-ReactomeAnalysisResult-method.html
4c5013a657960688e37a5315213f3b72 *html/plot_gsva_pathway.html
639807c8380cab86a6cc6c1641bb86fc *html/plot_gsva_pca-ReactomeAnalysisResult-method.html
cf8459b036e8cc175f865a7f065893d4 *html/plot_gsva_pca.html
06f86cb68ba13d3e70213dd8d11d35f0 *html/plot_heatmap-ReactomeAnalysisResult-method.html
57bb118a5c240dcb30d55cf4dd796fed *html/plot_heatmap.html
bed050cbe3b13e66cd86d19fb2a05b5d *html/plot_volcano-ReactomeAnalysisResult-method.html
c651d9a5653de0483884ea1a910f4258 *html/plot_volcano.html
353d0d73b8300bdceabfe25e400099b4 *html/print-ReactomeAnalysisRequest-method.html
a02ce561de02a3d898abfe55e3993465 *html/print-ReactomeAnalysisResult-method.html
f4e9c703bdd0528a69d7042b6b416b68 *html/reactome_links-ReactomeAnalysisResult-method.html
e03bda4bbe0d24c0b5277af8a25a2eb5 *html/reactome_links.html
239589b073e65d8afc7ecd17f7d0a367 *html/remove_dataset-ReactomeAnalysisRequest-method.html
d51fe5fbfb84a4e40f78f6244d6f60d7 *html/remove_dataset.html
53d46b4b6886da694a5c255c52804031 *html/result_types-ReactomeAnalysisResult-method.html
1e851c31b119d3fa05d17476cb8cc108 *html/result_types.html
308fb37959528f08159e12ee91b5e459 *html/set_method-ReactomeAnalysisRequest-method.html
2e4fabadb546cdf7243c5815476e8dac *html/set_method.html
7643ad7aef1dc1b9d9cd93ccdecbaf6c *html/set_parameters-ReactomeAnalysisRequest-method.html
acb240fe15a6f0653c14a3326cec22c1 *html/set_parameters.html
e0980fdfded343238eaf96c3c7b660cf *html/show-ReactomeAnalysisRequest-method.html
240fdc607a68e0fd009ba79e202c7192 *html/show-ReactomeAnalysisResult-method.html
0b2c376b60de02ee7922f0b4592f0a64 *html/start_reactome_analysis.html
