c7401181d97a6e7100ea7c885121ffa7 *CITATION
82d1951e56ff796ab3743f7e6afbd36b *DESCRIPTION
647e822a430e30cefcccd37636fee8c9 *INDEX
64b5637203af924bea8c8b49b3ea9db1 *Meta/Rd.rds
429cac54857c2ccdc9b23601d2e6f33e *Meta/data.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
c239af9211bec8f80bd1dadb40b29e70 *Meta/hsearch.rds
fab7f50e27e19580c4c5fcc6e2eade6e *Meta/links.rds
5a56aee7330f81b7f989f1dc827ec484 *Meta/nsInfo.rds
6f7e68ea75c7bcb631d9804bfaa0f892 *Meta/package.rds
ac2bbce3a35302c1e996fae7952088e7 *Meta/vignette.rds
f3d0986915e5c0916cd506c6df4ea3b6 *NAMESPACE
d784fa8b6d98d27699781bd9a7cf19f0 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/Rcade
42c9085b92f2a81b122925df9f2acdfa *R/Rcade.rdb
29b72d97a4ca597240984164bd5ddb01 *R/Rcade.rdx
c064ba014ead49f08f0581ac3b14e5a9 *data/RcadeSTAT1.rda
516af832466b66d99f97707d9a7f984c *data/datalist
e7a9820069ccaa53149880375e7ab33a *doc/Rcade.R
25784ba76ca0e96cc1269a992a868531 *doc/Rcade.Rnw
0fc4af5bb152d9fd629f9dcd98d8213d *doc/Rcade.pdf
220b527faca736ad9c9eed69c673106e *doc/index.html
3d078d2128660207486ae0da9171c6fa *extdata/STAT1/DE.csv
58692a3aced442860c5cf93175d63728 *extdata/STAT1/anno.csv
96a968ead80a0fd5fa465caf19baa4d9 *extdata/STAT1/targets.csv
786db4d62cfdbf49a656508f89975a70 *extdata/STAT1/wgEncodeSydhTfbsHelas3InputIfng30StdAlnRep1.bam
08dcb53838c255016b5d5f0ac4607d69 *extdata/STAT1/wgEncodeSydhTfbsHelas3InputIfng30StdAlnRep1.bam.bai
1eb65554f7219d6b03974a0fa4e46097 *extdata/STAT1/wgEncodeSydhTfbsHelas3InputStdAlnRep1.bam
98c0915ade5730dd94df607f85e5d0d5 *extdata/STAT1/wgEncodeSydhTfbsHelas3InputStdAlnRep1.bam.bai
5bd2cc228bff798b51f97a604a0ca93f *extdata/STAT1/wgEncodeSydhTfbsHelas3Stat1Ifng30StdAlnRep1.bam
d7c75c69dd1e70e1c130a30575425b5b *extdata/STAT1/wgEncodeSydhTfbsHelas3Stat1Ifng30StdAlnRep1.bam.bai
52b2f578797ceccf265dc16bd7fb5bdd *extdata/STAT1/wgEncodeSydhTfbsHelas3Stat1Ifng30StdAlnRep2.bam
b0b576de84db075efebdd9699ff2a510 *extdata/STAT1/wgEncodeSydhTfbsHelas3Stat1Ifng30StdAlnRep2.bam.bai
1eae845324d8b06dca223079444ab996 *help/AnIndex
8af80650786b80a7eb492a3b5b1ad28a *help/Rcade-class.html
4a23e9bd9a23559e8d0610d430f60335 *help/Rcade.rdb
5a425ed6ce684b2aa8bc96b2c762a20d *help/Rcade.rdx
a8c0bc224abbeff8ae99e8ec1252d1d9 *help/RcadeAnalysis.html
0705666bd3fd8d5096ce5c8e5e6c6284 *help/RcadeSTAT1.html
d96bfe11bb9fafd03c5368623d248271 *help/RcadeTrack-class.html
2bee5d17514c823619a4c1da629524db *help/aliases.rds
37ddffa07380981ccfa81c76f8040fb7 *help/constructRcadeTable.html
60f54722c334a0062da3de472204c732 *help/countReads.html
a823bcf27e89cb8b351d4d46108e29a0 *help/defineBins.html
7ab5b50dd3f1f2c51efe5fc7c3016f63 *help/diffCountsBaySeq.html
f516e047324c0ca59010f9a8578e2bed *help/exportRcade+2CRcade-method.html
f516e047324c0ca59010f9a8578e2bed *help/exportRcade-methods.html
f516e047324c0ca59010f9a8578e2bed *help/exportRcade.html
8af80650786b80a7eb492a3b5b1ad28a *help/getChIP+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/getChIP+3C-+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/getChIP+3C-.html
8af80650786b80a7eb492a3b5b1ad28a *help/getChIP.html
8af80650786b80a7eb492a3b5b1ad28a *help/getDE+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/getDE+3C-+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/getDE+3C-.html
8af80650786b80a7eb492a3b5b1ad28a *help/getDE.html
8af80650786b80a7eb492a3b5b1ad28a *help/getRcade+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/getRcade+3C-+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/getRcade+3C-.html
8af80650786b80a7eb492a3b5b1ad28a *help/getRcade.html
f32652331f2ad2af2f55666775955211 *help/paths.rds
8af80650786b80a7eb492a3b5b1ad28a *help/plotBB+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/plotBB.html
8af80650786b80a7eb492a3b5b1ad28a *help/plotBBB+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/plotBBB.html
8af80650786b80a7eb492a3b5b1ad28a *help/plotMM+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/plotMM.html
8af80650786b80a7eb492a3b5b1ad28a *help/plotPCA+2CRcade-method.html
8af80650786b80a7eb492a3b5b1ad28a *help/plotPCA.html
94b7a985c2a427ef32a8a013244f8ad1 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
1b3cc0ab02a04b747ddb458c01088c31 *html/Rcade-class.html
38551c7a74742fd45903b0d64117e0a7 *html/RcadeAnalysis.html
86640987b31521b62d9223b2a7093aa0 *html/RcadeSTAT1.html
8da9f3ffe32315359ab5c0d1c7e7780d *html/RcadeTrack-class.html
0ec1def7da56515241d206f87479e97a *html/constructRcadeTable.html
44c1643099001ea5aa4a12672477cebb *html/countReads.html
d4d10635c56e863040d640a035bcce29 *html/defineBins.html
b67c88dd769cf342c770e46865eaadab *html/diffCountsBaySeq.html
f229f999237f0db50f4b8bd513d74462 *html/exportRcade-methods.html
c32dbe945ea9a8ea93c5ce55ec4a4acd *unitTests/test_modules.R
