d29f0605dab6388c8068db53ac3f6422 *AdapterRemoval.exe
8a5dddca57867e7a69fa680948b33522 *CITATION
1972b5a752135d3cf926fff5635ac0ca *DESCRIPTION
d086bf72e402dcfeb435a20467bd9361 *INDEX
5ecd21757407f8ce3138186a676326e0 *Meta/Rd.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
bb5367f17440ad9f027282f0996997ac *Meta/hsearch.rds
1a97bcac3122c6b56f26a18d9115970b *Meta/links.rds
27e92a915fc2c6a77b0802a1bc914849 *Meta/nsInfo.rds
656e6ce545ccd049da560f1b90e7f941 *Meta/package.rds
b427f77f34b817454bb55c9ab74f0b2d *Meta/vignette.rds
028210b72bda0ca2317cab65dc9ca752 *NAMESPACE
aec354ca8a1ae1bb5b5cf6bf425caf77 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/Rbowtie2
2b0383444ce89316e3109a27066c6be2 *R/Rbowtie2.rdb
0e42371f75ea02b891ddb3f4d8e1a378 *R/Rbowtie2.rdx
552c81a3e1fa28b9db658083d1eb0674 *bowtie2
4b7dec684aa1d1ffa99c10ffb8a42616 *bowtie2-align-l.exe
d950724b97abfd7fcecc25e7f26ef3d3 *bowtie2-align-s.exe
dfd1a57fdad1cb7114bbb41bcd062fd7 *bowtie2-build
22f78be80d49bd99dc73f7c0906218bd *bowtie2-build-l.exe
321007ede62b98f8c6b12910fc2d0899 *bowtie2-build-s.exe
cc34b01d6da87c9f3426457988c83a83 *doc/Rbowtie2-Introduction.R
e0b65ef451f89d546bac23399e7b215c *doc/Rbowtie2-Introduction.Rmd
f9170a34b0a610e2dd14176b677578b9 *doc/Rbowtie2-Introduction.html
18ba84919b1a732c61781e0245c18cb4 *doc/index.html
3d5df35bf2e97e3f9602270a77cd6b52 *extdata/adrm/reads_1.fq
cedb9cf59618c2d02543fd6a273f8353 *extdata/adrm/reads_2.fq
163f1b0ead6962e41a18bb2ccc5149ba *extdata/bt2/reads/reads_1.fastq
a0529d01ceb200399b8d6fb703cc51f1 *extdata/bt2/reads/reads_2.fastq
d9cd45a2cfd805f55eea9b7ddc76233e *extdata/bt2/refs/lambda_virus.fa
05ab63cec0ba1ce889ec36c199db2ca8 *help/AnIndex
a26b7efb11b3732002bb3524d6a155ca *help/Rbowtie2.rdb
c3956ef8609b8bec3f424b609765bd53 *help/Rbowtie2.rdx
49c18cc3c29277b82c2e6d261fab9da6 *help/adapterremoval_usage.html
f5806dc8e8f866688b2f6ff1a6e8bfac *help/adapterremoval_version.html
125ff2f994d058233b23ecd42601f2b1 *help/aliases.rds
570ba82140974e8d053040785f46ecd5 *help/bowtie2-build.html
1a7f5e742b3fec8846a4325abb6920b4 *help/bowtie2.html
570ba82140974e8d053040785f46ecd5 *help/bowtie2_build.html
3420989ebf816752a793062728f9c2c2 *help/bowtie2_build_usage.html
e733f6200b4318a43fd64d6927f988c4 *help/bowtie2_samtools.html
cb537c169ab1bab2ebba0fce4682f91b *help/bowtie2_usage.html
989879a0875a4c120ac01f3c9ce1bc63 *help/bowtie2_version.html
052d7808cb0feca4290a16fbadaec650 *help/checkFileCreatable.html
052d7808cb0feca4290a16fbadaec650 *help/checkFileCreateable.html
ec70a0d3efb729f8e24bde65a8e42950 *help/checkFileExist.html
4cdfdf60598e07b68b83956c6c696ba8 *help/checkIndexType.html
90cb0bc36ef493f5c2ef6dbc3b07dd55 *help/checkPathExist.html
de19797b0ddc73e6a07b475c16b2bbe5 *help/checkSamtoolsExists.html
0aa5eafd4c3cfdc4ce64d2111551f29c *help/dot-callbinary.html
3840ebb09a1d270dbbfe4b2b49bb3665 *help/identify_adapters.html
55d2f52e687b6c415201b79a278f1e76 *help/paths.rds
893e8f7e29ddd701190a98e0dde70e01 *help/remove_adapters.html
3974770f88228f3899216545c501265d *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
1bbeed12a0bdd1535835cd6ab838486f *html/adapterremoval_usage.html
f2024d7fb10907fc4c1134d2b1e4781b *html/adapterremoval_version.html
c0bebaf7b8296bbd886b3f13b9af63c2 *html/bowtie2-build.html
2c55836861b5ca3e318fdcca2e5e00a6 *html/bowtie2.html
45352c0bff808eac7687589c1b4df346 *html/bowtie2_build_usage.html
c4054ce6fbee20ce05eb5b63a90861b1 *html/bowtie2_samtools.html
0bd974f35297b7a2be5c50ccba9c8f08 *html/bowtie2_usage.html
1e5ae1a797f1d94285efa666da919735 *html/bowtie2_version.html
c6b8b3ae4fb43ed115086750267886c1 *html/checkFileCreateable.html
80c12b3276d0ea947a361e48556af664 *html/checkFileExist.html
642695b4f5f3ad1e6bab76452003d232 *html/checkIndexType.html
2ed60e6eee654fcdcb9af1154beaa3c5 *html/checkPathExist.html
523e1361baf531bae42f0c17cfdc7c44 *html/checkSamtoolsExists.html
f014b18753b903374197b82df5f61316 *html/dot-callbinary.html
de7bcef48e8528a97c641795c6edcc2d *html/identify_adapters.html
8dbb2b17721c6b1db488380fdce72629 *html/remove_adapters.html
