download_dataset {RGMQL} | R Documentation

## Download Dataset

### Description

It donwloads private dataset as zip file from remote repository to local path, or donwloads and saves it into R environment as GRangesList, using the proper GMQL web service available on a remote server

### Usage

    download_dataset(url, datasetName, path = getwd())

    download_as_GRangesList(url, datasetName)

### Arguments

`url` | string url of server: It must contain the server address and base url; service name is added automatically
`datasetName` | string name of dataset to download
`path` | string local path folder where to store dataset, by default it is R working directory

### Details

If error occurs, a specific error is printed

### Value

None

GRangesList containing all GMQL samples in dataset

### Examples

    ## Download dataset in R working directory
    ## In this case we try to download a dataset of the user
    ## (public datasets from remote repository cannot be downloaded)

    ## Not run:

    remote_url = "http://www.gmql.eu/gmql-rest/"
    login_gmql(remote_url)
    download_dataset(remote_url, "Example_Dataset_1", path = getwd())

    ## Create GRangesList from user dataset Example_Dataset1 got
    ## from repository

    download_as_GRangesList(remote_url, "Example_Dataset_1")

    ## End(Not run)

[Package RGMQL version 1.14.1 Index]