mergeNetworks {RCy3} | R Documentation

## Merge Networks

### Description

Combine networks via union, intersection, or difference operations. Lots of optional parameters choose from!

### Usage

    mergeNetworks(
      sources = NULL,
      title = NULL,
      operation = "union",
      nodeKeys = NULL,
      nodeMergeMap = NULL,
      nodesOnly = FALSE,
      edgeKeys = NULL,
      edgeMergeMap = NULL,
      networkMergeMap = NULL,
      inNetworkMerge = TRUE,
      base.url = .defaultBaseUrl
    )

### Arguments

`sources` | List of network names to be merged.
`title` | (optional) Title of the resulting merged network. Default is a concatentation of operation and source network titles.
`operation` | (optional) Type of merge: union (default), intersection or difference.
`nodeKeys` | (optional) An order-dependent list of columns to match nodes across source networks. Default is "name" column for all sources.
`nodeMergeMap` | (optional) A list of column merge records specifying how to merge node table data. Each record should be of the form: c("network1 column", "network2 column", "merged column", "type"), where column names are provided and type is String, Integer, Double or List.
`nodesOnly` | (optional) If TRUE, this will merge the node tables and ignore edge and network table data. Default is FALSE.
`edgeKeys` | (optional) An order-dependent list of columns to match edges across source networks. Default is "name" column for all sources.
`edgeMergeMap` | (optional) A list of column merge records specifying how to merge edge table data. Each record should be of the form: c("network1 column", "network2 column", "merged column", "type"), where column names are provided and type is String, Integer, Double or List.
`networkMergeMap` | (optional) A list of column merge records specifying how to merge network table data. Each record should be of the form: c("network1 column", "network2 column", "merged column", "type"), where column names are provided and type is String, Integer, Double or List.
`inNetworkMerge` | (optional) If TRUE (default), nodes and edges with matching attributes in the same network will be merged.
`base.url` | (optional) Ignore unless you need to specify a custom domain, port or version to connect to the CyREST API. Default is http://localhost:1234 and the latest version of the CyREST API supported by this version of RCy3.

### Value

SUID of resulting merged network

### Examples

    mergeNetworks(c("Network 1", "Network 2"), "Merged Network")
    mergeNetworks(c("my network","string network"), "Merged Network",
                  nodeKeys=c("HGNC","query term"))

[Package RCy3 version 2.14.2 Index]