summary {ProteoDisco}

R Documentation

Display a summary of ProteoDiscography

Description

Display a summary of ProteoDiscography

Usage

summary(object, verbose = TRUE)

## S4 method for signature 'ProteoDiscography'
summary(object, verbose = TRUE)

Arguments

object	(ProteoDiscography): ProteoDiscography object.
verbose	(logical): Set the verbosity

Value

Displays information relating to the ProteoDiscography into the console. If verbose is set to TRUE, it will also output the imported genomic variants, splicing junctions and manual sequences as a list of tibbles.

Examples

# Import example ProteoDiscography (hg19)
data('ProteoDiscographyExample.hg19', package = 'ProteoDisco')
ProteoDiscographyExample.hg19 <- setTxDb(ProteoDiscographyExample.hg19, TxDb.Hsapiens.UCSC.hg19.knownGene::TxDb.Hsapiens.UCSC.hg19.knownGene)
ProteoDiscographyExample.hg19 <- setGenomicSequences(ProteoDiscographyExample.hg19, BSgenome.Hsapiens.UCSC.hg19::BSgenome.Hsapiens.UCSC.hg19)

summary(ProteoDiscographyExample.hg19)

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