seqinfo {ProteoDisco}

R Documentation

Retrieve seqinfo.

Description

Retrieve seqinfo.

Usage

seqinfo(x)

## S4 method for signature 'ProteoDiscography'
seqinfo(x)

Arguments

x	(ProteoDiscography): ProteoDiscography object.

Value

Returns an Seqinfo-class containing information on the imported genomic sequences.

Examples

# Import example ProteoDiscography (hg19)
data('ProteoDiscographyExample.hg19', package = 'ProteoDisco')
ProteoDiscographyExample.hg19 <- setTxDb(ProteoDiscographyExample.hg19, TxDb.Hsapiens.UCSC.hg19.knownGene::TxDb.Hsapiens.UCSC.hg19.knownGene)
ProteoDiscographyExample.hg19 <- setGenomicSequences(ProteoDiscographyExample.hg19, BSgenome.Hsapiens.UCSC.hg19::BSgenome.Hsapiens.UCSC.hg19)

seqinfo(ProteoDiscographyExample.hg19)

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