plot,PWM,missing-method {PWMEnrich}

R Documentation

Plotting for the PWM class

Description

This function produces a sequence logo (via package seqLogo).

Usage

## S4 method for signature 'PWM,missing'
plot(x, y, ...)

Arguments

x	the PWM object
y	unused
...	other parameters to pass to seqLogo's plot function

Examples

if(requireNamespace("PWMEnrich.Dmelanogaster.background")){
  data(MotifDb.Dmel, package = "PWMEnrich.Dmelanogaster.background")

  # plot the tinman motif from MotifDb
  plot(MotifDb.Dmel[["tin"]])
}

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