removeORFsWithSameStartAsCDS {ORFik}

R Documentation

Remove ORFs that have same start site as the CDS

Description

Remove ORFs that have same start site as the CDS

Usage

removeORFsWithSameStartAsCDS(grl, cds)

Arguments

grl	(GRangesList), the ORFs to filter
cds	(GRangesList), the coding sequences (main ORFs on transcripts), to filter against.

Value

(GRangesList) of filtered uORFs

See Also

Other uorfs: addCdsOnLeaderEnds(), filterUORFs(), removeORFsWithSameStopAsCDS(), removeORFsWithStartInsideCDS(), removeORFsWithinCDS(), uORFSearchSpace()

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