bedToGR {ORFik}

R Documentation

Converts bed style data.frame to Granges

Description

For info on columns, see: https://www.ensembl.org/info/website/upload/bed.html

Usage

bedToGR(x, skip.name = TRUE)

Arguments

x	A data.frame from imported bed-file, to convert to GRanges
skip.name	default (TRUE), skip name column (column 4)

Value

a GRanges object from bed

See Also

Other utils: convertToOneBasedRanges(), export.bed12(), export.bigWig(), export.wiggle(), fimport(), findFa(), fread.bed(), optimizeReads(), readBam(), readBigWig(), readWig()

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