export.bedo {ORFik} | R Documentation

## Store GRanges object as .bedo

### Description

.bedo is .bed ORFik, an optimized bed format for coverage reads with read lengths .bedo is a text based format with columns (6 maximum):
1. chromosome
2. start
3. end
4. strand
5. ref width (cigar # M's, match/mismatch total)
6. duplicates of that read

### Usage

    export.bedo(object, out)

### Arguments

`object` | a GRanges object
`out` | a character, location on disc (full path)

### Details

Positions are 1-based, not 0-based as .bed. End will be removed if all ends equals all starts. Import with import.bedo

### Value

NULL, object saved to disc

[Package ORFik version 1.14.7 Index]