filterBiotype {NoRCE} | R Documentation

## Extract the genes that have user provided biotypes. This method is useful when input gene list is mixed or when research of the interest is only focused on specific group of genes.

### Description

Extract the genes that have user provided biotypes. This method is useful when input gene list is mixed or when research of the interest is only focused on specific group of genes.

### Usage

    filterBiotype(gtfFile, biotypes)

### Arguments

`gtfFile` | Input gtf file for the genes provided by the extractBiotype function
`biotypes` | Selected biotypes for the genes

### Value

Table format of genes with a given biotypes

### Examples

    biotypes <- c('unprocessed_pseudogene','transcribed_unprocessed_pseudogene')
    fileImport<-system.file("extdata", "temp.gtf", package = "NoRCE")
    extrResult <- filterBiotype(fileImport, biotypes)

[Package NoRCE version 1.6.0 Index]