tidyFasta {MSstatsPTM}

R Documentation

Read and tidy a FASTA file

Description

tidyFasta reads and tidys FASTA file. Use this function as the first step in identifying modification sites.

Usage

tidyFasta(path)

Arguments

path	A string of path to a FASTA file.

Value

A data.table with columns named header, sequence, uniprot_ac, uniprot_iso, entry_name.

Examples

tidyFasta(system.file("extdata", "O13297.fasta", package="MSstatsPTM"))

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