7c940e117947d1495fc805a56a585f95 *AQP7/hg19_AQP7_gr.RDS
6156e25892b953e3e13c482d42533c6b *AQP7/hg38_AQP7_gr.RDS
f94518f75e6ef1068674f303a991e850 *AQP7/hs37d5_AQP7_gr.RDS
eda46bfbe301436dd1d8b1fd98bcf98d *DESCRIPTION
922249828dc8beb59b6c8edbbcfb726e *HLA/hg19_HLA_gr.RDS
6cadaac2a031fa5e81230e7b6eef0818 *HLA/hg38_HLA_gr.RDS
eb80de88f333fc8bd1b2fe22a069800c *HLA/hs37d5_HLA_gr.RDS
5b17382d757b8568a16a287782bb8b25 *INDEX
0b3923c7ae3759c03eb908a05ef8b44b *Meta/Rd.rds
3513e7824aa5e8e0b41da53899e63e79 *Meta/data.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
6f1227637d33b328d67f4cf03137b2b6 *Meta/hsearch.rds
13b810347028c9bda5ddc5caa1877e74 *Meta/links.rds
0231f4fdfebe4916f16808b6f79af356 *Meta/nsInfo.rds
37ce4e3f9c50fee99a68233c509ccf7b *Meta/package.rds
4a6f4c5e20cf65a8c7c201ccfb17ed10 *Meta/vignette.rds
dbbb8416030ca6c55bd60ab19bb59110 *NAMESPACE
f68885c1e19e41468d3a26d044204323 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/MADSEQ
64bb8ba6172ba7504282761fbe50019b *R/MADSEQ.rdb
3371be7f0018784a783b2677a36c8e38 *R/MADSEQ.rdx
bdd4aa2d57fb79ed77b948e0e50aafb4 *data/Rdata.rdb
126331a9a2cbbefc7f57d85df68d3609 *data/Rdata.rds
b30f7b5b32cb6dd086df7bfe15844fdd *data/Rdata.rdx
2e4ebc6fc3af0ce1c2907f9548d8e0af *doc/MADSEQ-vignette.R
223d4a9d1f4b7467fa58dd887b2d207a *doc/MADSEQ-vignette.Rmd
dad0f1213b334e2643a5cb5702ad3f55 *doc/MADSEQ-vignette.html
023cf3826252abde1cc64be5024be23f *doc/index.html
45a6f85c06b89084384f5baa3411829c *extdata/aneuploidy.bam
5d2f9800c7701b9c069549d9b538f3c0 *extdata/aneuploidy.bam.bai
e447cdbc61dc910c1ecf49413830e680 *extdata/aneuploidy.vcf.gz
801ca98d5c1fc701890c8720829ba02e *extdata/aneuploidy.vcf.gz.tbi
3460ad549cd63b775e1e2d2c6839c652 *extdata/aneuploidy.vcf1.gz
42c16af5590d9f56b3cd4ee1f640f09e *extdata/normal.bam
27360ec7b0b8b4f49baab9fb28a81b31 *extdata/normal.bam.bai
d8d3ffb5a1f6a0662e85497ec4e2f7da *extdata/normal.vcf.gz
c7af036642ac3916f25d4568da51f929 *extdata/target.bed
6ac2988079669859297d35397890ee7f *gap/hg19_gap_gr.RDS
2ee634fa8ac714a611294c4ebbe964c6 *gap/hg38_gap_gr.RDS
178175aedaf19d4b5fc37b953fdd8365 *gap/hs37d5_gap_gr.RDS
806e412887257e27d215b26eb8427a23 *help/AnIndex
ee0ca4d7dd989a8907cebc3a398e857a *help/MADSEQ-package.html
68b2ed1f6fa1cd6c2cc641c904e28d3e *help/MADSEQ.rdb
da78b44019cdd7153941e7bb6218a5ae *help/MADSEQ.rdx
cfb1332ead903589a3e7e48cf379b1e4 *help/MadSeq-class.html
cfb1332ead903589a3e7e48cf379b1e4 *help/MadSeq.html
e6f759c9576af95e9deba526576f355a *help/aliases.rds
f9205c4c9a3566db715cec2b578930b2 *help/aneuploidy_chr18.html
1511d6729670e1af969064ceca0a578a *help/deltaBIC+2CMadSeq-method.html
1511d6729670e1af969064ceca0a578a *help/deltaBIC.html
e7071dc93963304bc0426896c85b17cf *help/normalizeCoverage.html
384870820b10211588d5a83aae4c104d *help/paths.rds
391be2627b4fe1eec9e7baf1f8e80332 *help/plotFraction+2CMadSeq-method.html
391be2627b4fe1eec9e7baf1f8e80332 *help/plotFraction.html
4786d4343140044c9e55d47c3f5a245c *help/plotMadSeq+2CMadSeq-method.html
4786d4343140044c9e55d47c3f5a245c *help/plotMadSeq.html
c4f2b8e6836d29e5c889197cf3eb5340 *help/plotMixture+2CMadSeq-method.html
c4f2b8e6836d29e5c889197cf3eb5340 *help/plotMixture.html
40d0674cba617f3011fe3545d038f1e9 *help/posterior+2CMadSeq-method.html
40d0674cba617f3011fe3545d038f1e9 *help/posterior.html
c2201ae9f0d4552b2a1e506bbe37f5fe *help/prepareCoverageGC.html
5108fc25440b171f2c95acb6590d37bd *help/prepareHetero.html
418186b59ebd9ac17b74f4ae75329366 *help/runMadSeq.html
59308a94e14ed08ecefe9221b4c0e9d3 *help/summary+2CMadSeq-method.html
59308a94e14ed08ecefe9221b4c0e9d3 *help/summary-method.html
59308a94e14ed08ecefe9221b4c0e9d3 *help/summary.html
722877903fbe8dcdc70821921fd09131 *html/00Index.html
14b7b8ab7e4aacc8496a9be3d09317a0 *html/MADSEQ-package.html
71e7dcebd013438e17c5abf1dd4c0272 *html/MadSeq.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
b7d57eafd9cc4642c56a0c0b1e85a408 *html/aneuploidy_chr18.html
7e63e2a092bbc50958650c961229a7d2 *html/deltaBIC.html
df677ca2728620a1379505416e2dde5a *html/normalizeCoverage.html
5d8c7e8c267eb3afa2a7a91a7c1f30b9 *html/plotFraction.html
064f0e84ca1a718f3c4339fa986d0b75 *html/plotMadSeq.html
de69fbe4a299e4f9853c2945246d1e89 *html/plotMixture.html
087200a700879f77f3aaed2f80fd164e *html/posterior.html
5c20283617ffdc8e657167ab630b70b5 *html/prepareCoverageGC.html
e13e027787adde5d50477498e9982ba2 *html/prepareHetero.html
ba9be23728b83286c7d1b483537dfd31 *html/runMadSeq.html
ad2cdf6d0b00dd0b494e60d47efb3674 *html/summary-method.html
d53a9eb3d9e812c6f07ff9c3340a3bed *rjags/FourMix.txt
91892f4c8a1065de46951f299d8e2d5f *rjags/LOH.txt
5930df090a3de2ff95284ec8e5724584 *rjags/OneMix.txt
80f9a5a9b492296fe89b8ddf793779b9 *rjags/TwoMixMonosomy.txt
fd18d5914f99278bc7bf005e6fded968 *rjags/TwoMixTrisomy.txt
