diffSplicingResults {GeneStructureTools}

R Documentation

Method diffSplicingResults

Description

Method diffSplicingResults

Usage

diffSplicingResults(whippetDataSet)

## S4 method for signature 'whippetDataSet'
diffSplicingResults(whippetDataSet)

Arguments

whippetDataSet

whippetDataSet generated from readWhippetDataSet()

Value

differential splicing results data.frame (originally from a whippet .diff file)

See Also

Other whippet data processing: coordinates, filterWhippetEvents, formatWhippetEvents, junctions, readCounts, readWhippetDIFFfiles, readWhippetDataSet, readWhippetJNCfiles, readWhippetPSIfiles, whippetTranscriptChangeSummary

Examples

whippetFiles <- system.file("extdata","whippet/",
package = "GeneStructureTools")
wds <- readWhippetDataSet(whippetFiles)

diffSplicingResults <- diffSplicingResults(wds)

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