coordinates {GeneStructureTools}

R Documentation

Method coordinates

Description

Method coordinates

Usage

coordinates(whippetDataSet)

## S4 method for signature 'whippetDataSet'
coordinates(whippetDataSet)

Arguments

whippetDataSet

whippetDataSet generated from readWhippetDataSet()

Value

whippet splicing event coordinates as a GRanges object

See Also

Other whippet data processing: diffSplicingResults, filterWhippetEvents, formatWhippetEvents, junctions, readCounts, readWhippetDIFFfiles, readWhippetDataSet, readWhippetJNCfiles, readWhippetPSIfiles, whippetTranscriptChangeSummary

Examples

whippetFiles <- system.file("extdata","whippet/",
package = "GeneStructureTools")
wds <- readWhippetDataSet(whippetFiles)

coordinates <- coordinates(wds)

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