get_dldir {GEOfastq}

R Documentation

Gets part of path to download bulk RNAseq sample from EBI or NCBI

Description

Gets part of path to download bulk RNAseq sample from EBI or NCBI

Usage

get_dldir(srr, type = c("ebi", "ncbi"))

Arguments

srr	SRR/ERR run name
type	Either 'ebi' or 'ncbi'

Value

String path used by get_fastqs.

Examples

get_dldir('SRR014242')

---