getCGinfo {ENmix}

R Documentation

CpG probe annotation inforamtion

Description

Extract CpG probe annotation inforamtion from an rgDataSet

Usage

getCGinfo(rgSet, type="IandII")

Arguments

rgSet	An object of class rgDataSet
type	One of the following options "I","II","IandII","ctrl", indicating type I, type II type I & II or control probes type

Value

An object of data frame class

Author(s)

Zongli Xu

Examples

require(minfiData)
path <- file.path(find.package("minfiData"),"extdata")
#based on rgDataset
rgSet <- readidat(path = path,recursive = TRUE)
cginfo=getCGinfo(rgSet,type="IandII")

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