6860b8d3a9a15e8882bd37d9ecf96e84 *CITATION
55aea65ced98ef57f4b60131c78b7fe9 *DESCRIPTION
6d9a97b0a78362a7ca8105e9c87c36d8 *INDEX
8dae609772b13b5ca488f560e7bf4248 *Meta/Rd.rds
fb7fdc49e6f7592b59f7a8109e5c0689 *Meta/features.rds
7fac3d3341b9e29189476898e8e839d3 *Meta/hsearch.rds
992dd2954c7477792570af51cb3fde22 *Meta/links.rds
3e0213f10468077d4b22c1d98ca1b308 *Meta/nsInfo.rds
6724e1f4e3aca5885fa2d26ca706b455 *Meta/package.rds
291abfbc5e47f14940a22e044739b4af *Meta/vignette.rds
2badde7146058bf8e3cb42c6a9a7f145 *NAMESPACE
b7bca2119044e100b779753a53f8545a *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/CNVRanger
fc8736d1b12bdd37933ce66d98013570 *R/CNVRanger.rdb
77aa4038c8a4f0583088db0ebc477f5d *R/CNVRanger.rdx
70dcd2abd452b34b4968abbd2b1ad116 *doc/CNVRanger.R
0c8da1a4294c997ed740bc503a449094 *doc/CNVRanger.Rmd
28c70f4328ee98a8802c0dfb28d64998 *doc/CNVRanger.html
2b76d1b50f09c5a8d1b544b379db528a *doc/index.html
c5343759f0a014da9875d14a7fd5e5ea *extdata/CNVOut.txt
6a58cc97f0bb5d688240766564d61505 *extdata/CNVOut_noMap.txt
9fe14aa70e860411803e7e5fb8b4ea7a *extdata/GBM_GISTIC_peaks.rda
9c8027d08167db5252c991b1dcb96036 *extdata/GT1068.cnv.txt.adjusted
b191da6c9489316c6d41eca48e2e9b54 *extdata/GT112.cnv.txt.adjusted
ee407d24bd87142ff186a15045548d30 *extdata/GT1195.cnv.txt.adjusted
6d46dcf9dcac4c7d127501bdfc7de7c2 *extdata/GT1334.cnv.txt.adjusted
4dcf5ee8095c2fbf4612a3bdd9fc40f0 *extdata/GT175.cnv.txt.adjusted
c6185eafc72d3d819460c3cc76f2eaa0 *extdata/GT2391.cnv.txt.adjusted
3c6f17d1bef6e7137947130544e701c5 *extdata/GT356.cnv.txt.adjusted
d73a6e9724d76401baa764f5982d5d4c *extdata/GT546.cnv.txt.adjusted
b9057b3b49ba9b7e00cd700b5a62baf2 *extdata/GT622.cnv.txt.adjusted
c75dc60c5e0f7e78b07e27c1dfa76ac0 *extdata/GT911.cnv.txt.adjusted
a7f3a9565266e574843aa3a283f338a4 *extdata/MapPenn.txt
cb9d4d13fec59d74e29260269e67b1a9 *extdata/Parus_major_chr_sizes.txt
28e2929428ea10c848180497bdfdb91d *extdata/Phen.txt
860143afea52eebff90414d2150a9619 *extdata/Pheno.txt
1b7378e5c916b7a805ab299fc608a8ff *extdata/Silva16_PONE_CNV_calls.csv
189ff3fdc582d0a5582245d3e9c648e9 *extdata/counts_cleaned.txt
1eebb7f4b33675b2bac6cc8e1ab0d4b6 *help/AnIndex
9053c7038b82f16ac17e03d857228a73 *help/CNVRanger.rdb
bfd3033ffedf26f66d5764a1e99c668a *help/CNVRanger.rdx
b76e0ee3f5dd44bb08cacbd7298d3b35 *help/aliases.rds
5a9e45f70eb6e40a984aacef2f6514f6 *help/cnvEQTL.html
656fe568289fe9dfe744f3eb3a9d30ba *help/cnvGWAS.html
cb2fd498da5a6207baa8b878159fe6e2 *help/cnvOncoPrint.html
1ec6d982d65e1b339c3f7151fbb29dd5 *help/generateGDS.html
04ece3833f3257233c50ccc8dc8f2ce4 *help/importLrrBaf.html
b125e296560a665761362874d07be072 *help/paths.rds
c8a2b49bbc0a23901f0dacbc8bba33a3 *help/plotEQTL.html
f76a7137d9d8de6297d701593d68a02c *help/plotManhattan.html
217d34164a5dc4483dab244af6252cd0 *help/plotRecurrentRegions.html
f90f093bdbfa1a7153f0c46928d1fc6e *help/populationRanges.html
6814d7b597ad28eb665e6c1e83fcc80f *help/setupCnvGWAS.html
8c1f31223f8ec5c85b1e37e6d94770f0 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
3b49fdb6a9e4118de35c0a241ffda481 *html/cnvEQTL.html
56db07bee2bf20697a0f77c2bc323917 *html/cnvGWAS.html
70fcfc20581a1f838bc73741e2b01a76 *html/cnvOncoPrint.html
7b7602ef87a8529f6d8ad67af42ad367 *html/generateGDS.html
82aa5026cba9da4c641fe86b0785408e *html/importLrrBaf.html
502f4cd644a36d7f4b65a5d560e0fba8 *html/plotEQTL.html
d37efc3fcad0bc21bc9e62b69de74911 *html/plotManhattan.html
2d6695e4a4a760cc11a3e808b321e376 *html/plotRecurrentRegions.html
f56a314d89d74368a1f1c57388867e01 *html/populationRanges.html
bcd8b1c5041010947f4beb59498c6d6f *html/setupCnvGWAS.html
e0b9bfc0963880df0207ebaf73aba5a8 *vignettes/CNVRanger.png
034ae3351afb42a7975e3817f38d5ea0 *vignettes/CNVsegments.png
c49d479e5c97b8ab9d441dcc3e0c3420 *vignettes/Expression.png
3afbbc51fa5423bda827fef675acdae6 *vignettes/Input.png
3c482e35f515ad3370f4e28e25b3d0f4 *vignettes/Overlap.png
f557c49e6a8636491e7994d852c31992 *vignettes/Phenotype.png
08af82bda00ef3001e376aed18fb374d *vignettes/Summarization.png
