77269c93d53f063a29d9732949aebafc *DESCRIPTION
753d626b17440ef6f7dc7a11c75b6ebb *INDEX
88945b1d07f1a1d7877ba5c9be1e4176 *Meta/Rd.rds
b183de4b399955807302e7adf1d2dc7d *Meta/data.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
8faf2590cfb6d41e352bc6a777ee9c8c *Meta/hsearch.rds
f4059d0e211a0f5f9ffacfdb2f3cba74 *Meta/links.rds
b6812642ec291205103aa0a0c8936a1f *Meta/nsInfo.rds
30f673f0a24475e8dd2b686dbd7c4c8b *Meta/package.rds
072f22a779508bd32325381b6c510e3b *Meta/vignette.rds
09f176c3011cf28c47f954d13528d007 *NAMESPACE
0e712c3c76c578c2754d3f6cd934084a *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/CNVPanelizer
e7c146f2bbae693f4b07cde409fd5683 *R/CNVPanelizer.rdb
b7d023477a109764ea47e7c9f87544f6 *R/CNVPanelizer.rdx
de63305d03a8c2dfb54ace5d42e26030 *data/referenceReadCounts.RData
dc34f4ffdb9cb3a853bf339bad776943 *data/sampleReadCounts.RData
a938a401706b424ae07011eddc671770 *doc/CNVPanelizer.R
1eb1a42d9faa368e23ae0aa52cfe4023 *doc/CNVPanelizer.Rnw
6a7c942f174246a5ad6bc1015498d2e1 *doc/CNVPanelizer.pdf
00ab7eb5ba41a589c46e6e6116504f86 *doc/index.html
d41d8cd98f00b204e9800998ecf8427e *extdata/regions.bed
2852cb12477d4d8d41f3deca6bf238d7 *extdata/www/CNVPanelizerLogo.png
7869bef63182a91da1dad2225e899a42 *extdata/www/favicon.png
3fa5094d1504ae0db60b4daacb74383d *help/AnIndex
859a69869c42de697875ab6e97c29e05 *help/Background.html
10aa47c263675b71610a34cd7e314ddb *help/BedToGenomicRanges.html
0e8bb0d7695f052ca878a88eee1b8aac *help/BootList.html
917cd198b80d1eaa5fb21b551fdaaa99 *help/CNVPanelizer-package.html
917cd198b80d1eaa5fb21b551fdaaa99 *help/CNVPanelizer.html
ad7d02d2fb43a065783c69fd4046a094 *help/CNVPanelizer.rdb
6d944d4431c4c13fc1708ec6031054af *help/CNVPanelizer.rdx
2bccfb731ff83b3ed8aa4909035dd229 *help/CNVPanelizerFromReadCounts.html
7f1f2e0e7f974e99493c731e1ff83b52 *help/CNVPanelizerFromReadCountsHELPER.html
eb7b81b3ad1450d7557320c49a62b152 *help/CollectColumnFromAllReportTables.html
6b0255edfc891f7205e27a77071992e8 *help/CombinedNormalizedCounts.html
90c5e92bc43b7dc2dbd4e5365cc6db96 *help/IndexMultipleBams.html
7d04a6c3d5e5c797da5a6b08f9f0254d *help/NormalizeCounts.html
7d04a6c3d5e5c797da5a6b08f9f0254d *help/NormalizedCounts.html
69a63daad212f3d38e35ffe3f03c29e7 *help/PlotBootstrapDistributions.html
f0e5747b7862c0bd2e7c693083a453ff *help/ReadCountsFromBam.html
1dab27387a65f8157d39cc6c9ba977aa *help/ReadXLSXToList.html
00317ca1c92a60321b90570b1312cc40 *help/ReportTables.html
f52281dca319a1fc28e2ecd7c295b092 *help/RunCNVPanelizerShiny.html
ca62e6332441adb30a24e2eed0a59dd5 *help/SelectReferenceSetByInterquartileRange.html
1683c7439480a46376828c8b4cc1e418 *help/SelectReferenceSetByKmeans.html
ae1dd16ceb33a6b71d4d80fe263054aa *help/SelectReferenceSetByPercentil.html
f5a20294f6a7174f88be50dba97ae239 *help/SelectReferenceSetFromReadCounts.html
8164a917149867f43f41a5320b61d0e5 *help/StatusHeatmap.html
f94bb722350d105510f7a58d716d180b *help/WriteListToXLSX.html
ac8004a5ea8aca37578d7a9226ec5930 *help/aliases.rds
8fea5748bffef5c9db87711b0e2447f0 *help/paths.rds
98b259843d5d0937a97b2862c1cec2a2 *help/referenceReadCounts.html
36a3bf930bee05cb6a7d12517959580f *help/sampleReadCounts.html
c02b04d53fa125118166cab16fb69d5d *html/00Index.html
35d2dd7ab63e0fc11b25008a22e448ea *html/Background.html
76a92f0fb5579a29582291b7957d9eac *html/BedToGenomicRanges.html
31a60b6f25c903879706ff13cdb0be06 *html/BootList.html
a962b73c9cd286f5925227f4788654a3 *html/CNVPanelizer-package.html
e2437b5622f10dea3e5e0d0e641e3959 *html/CNVPanelizerFromReadCounts.html
de0e6cb86e600fb75ef60d50013a28e4 *html/CNVPanelizerFromReadCountsHelper.html
ac6dc37671eb0f1f3ebc39c901685130 *html/CollectColumnFromAllReportTables.html
be796f1ec531857ec2bad0ec31ce57ea *html/CombinedNormalizedCounts.html
626e72b20f16d054414cf372b7a4f939 *html/IndexMultipleBams.html
f1ba7a432672a61b518d8d26f8c407cf *html/NormalizedCounts.html
d576aac610110dd356f759bc5e6a387b *html/PlotBootstrapDistributions.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
5c76b218b10e8fb45c83d07070a30dec *html/ReadCountsFromBam.html
5cd0876df87d76ea31d309b1b20e667c *html/ReadXLSXToList.html
9fcb5065db4300634d4838a12d8212d4 *html/ReportTables.html
93374577add2baa40a62c466bfdbb664 *html/RunCNVPanelizerShiny.html
9df1244625911a9eb6a3a7f5a0a02b03 *html/SelectReferenceSetByInterquartileRange.html
c1f5dbcdb9e441be3bd67f9d6c1c8220 *html/SelectReferenceSetByKmeans.html
a745077590f7df45b3c879460c0d2ca3 *html/SelectReferenceSetByPercentil.html
4ee1b913c0824abb8ad764d773b3cd56 *html/SelectReferenceSetFromReadCounts.html
1cdffe4f858ee816fd269b32938b4d45 *html/StatusHeatmap.html
6e3743aae3e97fd7f9d957facae3c703 *html/WriteListToXLSX.html
e21fe3b9b3b38a24a2332a53d0828d0a *html/referenceReadCounts.html
a87c8f2a37991f078d539acaa301e180 *html/sampleReadCounts.html
94bb07d505b09850425339b59a60315e *unitTests/test_testing.R
