import.bedScore {CAGEr}

R Documentation

import.bedScore

Description

Imports a BED file where the score indicates a number of counts for a given alignment.

Usage

import.bedScore(filepath)

Arguments

filepath

The path to the BED file.

Value

A GRanges object where each line represents one nucleotide.

See Also

Other loadFileIntoGPos: bam2CTSS(), import.CTSS(), import.bam.ctss(), import.bam(), import.bedCTSS(), import.bedmolecule(), loadFileIntoGPos(), moleculesGR2CTSS()

Examples

# TODO: add exmaple file
# import.bedScore(system.file("extdata", "example.bed", package = "CAGEr"))

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