CTSScumulativesTagClusters {CAGEr} | R Documentation

## Get/set CTSS cumulative TC or CC data

### Description

Accessor function.

### Usage

    CTSScumulativesTagClusters(object, samples = NULL)

    ## S4 method for signature 'CAGEexp'
    CTSScumulativesTagClusters(object, samples = NULL)

    CTSScumulativesCC(object, samples = NULL)

    ## S4 method for signature 'CAGEexp'
    CTSScumulativesCC(object, samples = NULL)

    CTSScumulativesTagClusters(object) <- value

    ## S4 replacement method for signature 'CAGEexp'
    CTSScumulativesTagClusters(object) <- value

### Arguments

`object` | A `CAGEexp` object.
`samples` | One or more valid sample names.
`value` | CTSScumulativesTagClusters data

### Value

List of numeric Rle.

### See Also

Other CAGEr clusters functions: `CTSSclusteringMethod()`, `CustomConsensusClusters()`, `aggregateTagClusters()`, `clusterCTSS()`, `consensusClustersDESeq2()`, `consensusClustersGR()`, `cumulativeCTSSdistribution()`, `plotInterquantileWidth()`, `quantilePositions()`, `tagClustersGR()`

Other CAGEr accessor methods: `CTSSclusteringMethod()`, `CTSScoordinatesGR()`, `CTSSnormalizedTpmDF()`, `CTSStagCountDF()`, `GeneExpDESeq2()`, `GeneExpSE()`, `consensusClustersGR()`, `expressionClasses()`, `genomeName()`, `inputFilesType()`, `inputFiles()`, `librarySizes()`, `sampleLabels()`, `seqNameTotalsSE()`, `tagClustersGR()`

[Package CAGEr version 2.0.2 Index]