import.bedCTSS {CAGEr} | R Documentation

## import.bedCTSS

### Description

Imports a BED file where each line represents a single base, with a score counting the number of CAGE transcription start sites (CTSS).

### Usage

    import.bedCTSS(filepath)

### Arguments

`filepath` | The path to the BED file.

### Value

A GRanges object where each line represents one nucleotide.

### See Also

Other loadFileIntoGPos: `bam2CTSS()`, `import.CTSS()`, `import.bam.ctss()`, `import.bam()`, `import.bedScore()`, `import.bedmolecule()`, `loadFileIntoGPos()`, `moleculesGR2CTSS()`

### Examples

    # TODO: add exmaple file
    # import.BED(system.file("extdata", "example.bed", package = "CAGEr"))

[Package CAGEr version 2.0.2 Index]