1b576a0e2a99839d8f18164982d42057 *DESCRIPTION
18592492ca6ecdef02c469b8be23767e *INDEX
d70000a200847fb539eac02776ad0a62 *Meta/Rd.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
ead13aafbcd8be0c6fdcfeb0da929608 *Meta/hsearch.rds
a7c1ee9f2648528dc5309917c9be2360 *Meta/links.rds
27beef145ecee12c471a2939bea363db *Meta/nsInfo.rds
e4208e7da2f494564cd1511f6e46dc81 *Meta/package.rds
83b7df4fcb68b79766184f3706e249bd *Meta/vignette.rds
26f55ef83799bdfaea68f953b19c496a *NAMESPACE
a1f448974b359781e4fd33d8a845980b *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/nearBynding
abe6936ba926e0a8e478a7e8f8c500de *R/nearBynding.rdb
b6c08ac6fe81e204930bc8ec984ca743 *R/nearBynding.rdx
e59bda1b3d33dfa3293475cf9f1b4c46 *doc/index.html
af3dae63442385154ebcd02a49811a12 *doc/nearBynding.R
80c1debda56a3692ad5c95eebf6a39c9 *doc/nearBynding.Rmd
17be4f348c5ad5061e37cd96e4643476 *doc/nearBynding.pdf
ae6d7e4e4567a736e0ad90bf0511069f *extdata/Homo_sapiens.GRCh38.chr4&5.gtf
a7fa2ed61417a7bf406e409de647a9b3 *extdata/bulge_liftOver_chr4and5.dist
7da5930fb5148f0a236ee301e41c951a *extdata/chr4and5.bam
ac452d2dcc2e0cbdb3b6b1dc944b03a2 *extdata/chr4and5_3UTR.fa
133d71d3bb199112646fbddcfa265a23 *extdata/chr4and5_3UTR.out
6c14d3f68c7d0733bd6cbb64bb80da1f *extdata/chr4and5_sorted.bedGraph
4cb3c850c78f974e07340db1735206ac *extdata/exterior_liftOver_chr4and5.dist
56b3217cbc242f33b8d0b50d9f5da2c4 *extdata/hairpin_liftOver_chr4and5.dist
82e36e01fa26480931039ac178ad8e83 *extdata/hg19.genome
75afe0a7c5316fe36c565fd9c77e8b27 *extdata/hg38.genome
03905f4b4e1949cd5cd7f8cdaf57686a *extdata/internal_liftOver_chr4and5.dist
2607aeb94863f471b977163026d25bd4 *extdata/multibranch_liftOver_chr4and5.dist
5f2baef298cc5a9b2d19b79b7bf8ee51 *extdata/stem_liftOver_chr4and5.dist
91dab4ee9482c5fc7cf67427b2f4065e *extdata/transcript_list.Rda
b036d74873d4b78539543ef32fbdb704 *help/AnIndex
9f006e6c35b218177d55e92089b3e416 *help/CleanBAMtoBG.html
02c2c74fdcceb252a76d05fbeea1a3f3 *help/CleanBEDtoBG.html
8eff5715e528e74bc7883e5e81739ffc *help/ExtractTranscriptomeSequence.html
1377b14fc65c6a9bf5feea0c5b53b9a8 *help/GenomeMappingToChainFile.html
c866f2244491972fe30b2059d13346c7 *help/aliases.rds
ad28daddec7ecd31a0bc915906212f92 *help/assessGrouping.html
258126ba9003bf94d7d8a48adb6afce9 *help/bindingContextDistance.html
19d3750f9bd24a2f4a6c626d2fb66d72 *help/bindingContextDistanceCapR.html
9360f8d638a7b751c2cf907029585fa4 *help/getChainChrSize.html
b9b276cb98f247404b424b2f7d0768fb *help/get_outfiles.html
038c49bbbbecd1283f77703aed4ebed7 *help/liftOverToExomicBG.html
ce4ca55d4d4b610c5220bc1e52233527 *help/nearBynding-package.html
ce4ca55d4d4b610c5220bc1e52233527 *help/nearBynding.html
18e86e19701808893e4e11bc0f1d8bb8 *help/nearBynding.rdb
e44216c4be72b006db0b957913d888d8 *help/nearBynding.rdx
61e190891dc02495dee509cac197883a *help/paths.rds
98bef72fb0c449fcaf37352991f58ba9 *help/processCapRout.html
02690d79369301e2afd37f69f875815f *help/runCapR.html
c3ce85068e53717d221b0db6754032e5 *help/runStereogene.html
215a6c2b25f17b84b7dd94ab8a7d3f4d *help/runStereogeneOnCapR.html
2ec172ba8b0d8e13027bfd1731e3c195 *help/symmetryCapR.html
98817cb88cd2024467ec5f6df1a1168e *help/symmetryContext.html
ead88181b2b50f4bc06ef6f2126275f1 *help/visualizeCapRStereogene.html
67d583b658922b0f998dce072491bb93 *help/visualizeStereogene.html
ce871d2fd69a662cbd68dad1ceebc021 *help/write_config.html
46cc32e96671470cff27b70b9d23e4c8 *help/write_fasta.html
59447843a512fd4501f8200a968d4ee4 *html/00Index.html
9178032ddbd84afe816d0b7fcb768746 *html/CleanBAMtoBG.html
0f0fb52038b101ed858277867979019a *html/CleanBEDtoBG.html
fc7875052f966250962d985408c3845a *html/ExtractTranscriptomeSequence.html
6b833a709f0956bddab66c08f71fa7f1 *html/GenomeMappingToChainFile.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
eba68d961c92a8ede755d6932a457e6a *html/assessGrouping.html
277a6b981d8732147809073be0a82ced *html/bindingContextDistance.html
9a93be406628268d8856ad086f3be4ee *html/bindingContextDistanceCapR.html
a6851b13929b95987c1cc15b37728316 *html/getChainChrSize.html
3a2d841eeeef59dbedf127a90f051875 *html/get_outfiles.html
943368862ebd7ce4a2292f6b0ea4ad10 *html/liftOverToExomicBG.html
a5ae2ec585ce90f42c6e40322da027c9 *html/nearBynding-package.html
f085549c7aeb4a405cc8663d92856292 *html/processCapRout.html
c8993695272d631dad74d68c4d4f5e2c *html/runCapR.html
76b308b5068d60488fedb38abeb634b2 *html/runStereogene.html
752ff671fbbe3cf41bfc3fb8365ad962 *html/runStereogeneOnCapR.html
facb5d043ffb1eeb07ecb7374f25894f *html/symmetryCapR.html
8af1c48ed2969953ac101f8c314606dc *html/symmetryContext.html
d12f2fe9125f7cb83db334818fc14fd7 *html/visualizeCapRStereogene.html
1206ccff8a862a6c4b21b92869852e35 *html/visualizeStereogene.html
555a69d1328987a0a6d94d524b0281c1 *html/write_config.html
e74eb7c9d811a08c04b222c654b08495 *html/write_fasta.html
