Borda                   Ensemble method for miRNA target prediction
                        using Borda count election
BordaTopk               Ensemble method for miRNA target prediction
                        using Borda count election with topk targets
Dcov                    miRNA target prediction with the Distance
                        correlation method
DiffExpAnalysis         Differentially expressed analysis
Elastic                 miRNA target prediction with the Elastic-net
                        regression coefficient method
Extopk                  Extract top k miRNA-mRNA interactions
GOBPenrichment          Functional enrichment analysis
Hoeffding               miRNA target prediction with the Hoeffding
                        correlation coefficient method
ICPPam50                Identify miRNA targets by ICP and PAM50
IDA                     miRNA target prediction with the IDA method
ImputeNormData          Filter, impute, and normalise data.
KEGGenrichment          Functional enrichment analysis KEGG enrichment
                        analysis for a gene list
Kendall                 miRNA target prediction with the Kendall
                        correlation coefficient method
Lasso                   miRNA target prediction with the Lasso method
MI                      miRNA target prediction with mutual information
                        method
Pearson                 miRNA target prediction with the Pearson
                        correlation coefficient method
RDC                     miRNA target prediction with the Randomized
                        Dependence Coefficient method
Read                    Read dataset from csv file
ReadExtResult           Read results from other methods
Spearman                miRNA target prediction with the Spearman
                        correlation coefficient method
Standardise             Stardarsise the dataset Stadardise the dataset
                        to have mean=0 and std=1 in each column.
ValidateAll             Validate the targets of all miRNA using both
                        experimentally confirmed and transfection data
Validation              Validate the targets of a miRNA
ValidationT             Validate the targets of a miRNA using
                        transfection data
Zscore                  miRNA target prediction with the Z-score method
bRank                   Extract topk predicted targets of a miRNA Rank
                        all the targets of a miRNA and extract the topk
                        targets
convert                 Convert miRNA symbols from a miRBase version to
                        another
experiment              Function for validate the results from all 12
                        methods.
filterAndCompare        Filter and compare the validation results from
                        12 methods Keep the miRNAs that have at least
                        noVal confirmed targets and compare the
                        validation results from all methods.
getData                 getData from GDC
identifymiRTargetsByEnsemble
                        Identify the top miRNA targets by an ensemble
                        method with ICP-PAM50, Pearson and Lasso
identifymiRTargetsByICPPam50
                        Identify the top miRNA targets by ICP and PAM50
miRLAB-package          A dry lab for exploring miRNA-mRNA
                        relationships
readHeader              Read the header of the dataset
