14411ded8d61573d0d51cd3cdc579f94 *CITATION
dbc065f2efe309abab481e41254968be *DESCRIPTION
32adb9716280a13fffbf8041506d6435 *INDEX
fa19a3af1398e9c478ea6de566d53bdd *Meta/Rd.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
f7759fbab638fa96274792d04e5b2601 *Meta/hsearch.rds
3d22f50f025244e88e25be9776fa79e4 *Meta/links.rds
3034a84f49f3dbbd589aa5f0ecc2b72c *Meta/nsInfo.rds
5d04de584cd73b1ff642cfcb0d1fb7e3 *Meta/package.rds
906b86e0436a28a95d6568a1860040d0 *Meta/vignette.rds
d9298736355b8b67fbdf97a51861b441 *NAMESPACE
4720ff22c3860a6008becb69357e72b1 *NEWS.md
d6c68f1fe41ced6e98a766a3757313da *R/megadepth
77e5f7ef858bc5db049e6f81311eae5b *R/megadepth.rdb
091edb68def37ff90cfdef9777a141aa *R/megadepth.rdx
4887a3f5e7f2750f6ee9cd87921ce7b1 *doc/index.html
40f174aea376cba5d120afe9d17ff139 *doc/megadepth.R
4b8c6e4c341c14195fbf78cce16bd2f2 *doc/megadepth.Rmd
f0065e65c8b34ed7743ce02251c35556 *doc/megadepth.html
024f37da5e180c1ffbbcb8c0f6f97121 *help/AnIndex
d40bd871e449c67d0039d236131c11dc *help/aliases.rds
c72466ca9743708732145a2e414204e0 *help/bam_to_bigwig.html
1031d1fa6a0ec4b7af38f9052ab49a45 *help/bam_to_junctions.html
c35fcffb95aa37e70853474b3c966952 *help/get_coverage.html
a815eb340ae48624a07635851f1cee22 *help/install_megadepth.html
84998b0ab4c8795408bdc358a0f9fb48 *help/megadepth.rdb
2de660316e82c73c7f1c2272439294a6 *help/megadepth.rdx
77293f954f30f07f521a544be82599e7 *help/megadepth_cmd.html
77293f954f30f07f521a544be82599e7 *help/megadepth_shell.html
9358fd2abc537e2021b3477f7258a2e9 *help/paths.rds
0e256a00d688498bb51d377c70653975 *help/process_junction_table.html
31974594b324f3cce42dc8a768aad13d *help/read_coverage.html
31974594b324f3cce42dc8a768aad13d *help/read_coverage_table.html
e031d5be92302353bee08f8092cad6c2 *help/read_junction_table.html
7e78640b09cdf8200dec6b243766f1c3 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
fd7d94073e2b1388cf4b615c67fdd2ed *html/bam_to_bigwig.html
690ae90e092d75c5198027c1ebf71ad8 *html/bam_to_junctions.html
a029b4efee33e46b561a347b33daa00d *html/get_coverage.html
7a5577702c3e6abcbd310ae3cfc2d6a5 *html/install_megadepth.html
8291af348cd489a5e0f2875e6ff30646 *html/megadepth_cmd.html
d6784e4bef894165a9e5e0f4862b67ac *html/process_junction_table.html
0ece3e0477c3fe3c777159e56e71b12d *html/read_coverage.html
6b9f3848fed50d29491d7cff96ddf9ed *html/read_junction_table.html
2b067614d9fececa6c05e53ac8a4b54a *tests/long_reads.bam
96a2d30d7cbb6f1b77febb02388b5228 *tests/test.bam
2464c1808143637a273c0b8dbc0aab0f *tests/test.bam.all.bw
da9f9b4d5960544cba1c37e729dc872f *tests/test.bam.bai
eb0fd19aad92abed727e74875ffb699a *tests/test2.bam
ce8fd60d1f476613de37ff29c1dcca4d *tests/test3.bam
563da81f634c424d4479b10673b065ae *tests/test_exons.bed
2464c1808143637a273c0b8dbc0aab0f *tests/test_output_files/test.bam.all.bw
11b90a7de8c1ce31002029f1c952cefe *tests/test_output_files/test.bam.alts.tsv
dcb8a42636a2e2f37182e39029db0409 *tests/test_output_files/test.bam.annotation.tsv
58c94002c3a6dc8c641b877a5e1c3ffa *tests/test_output_files/test.bam.ends.tsv
dc5fc63b9783d6298945319dd625cc5e *tests/test_output_files/test.bam.frags.tsv
10bad76a5be373fabdaca9d1584e7988 *tests/test_output_files/test.bam.softclip.tsv
f5f736b3b9ba5f45a84d0502328e5df7 *tests/test_output_files/test.bam.starts.tsv
0176bb1d0f29a9dd8978076885202782 *tests/test_output_files/test.bam.unique.bw
4185ac72cbe1108ea8bc22198eceef9a *tests/test_output_files/test.bam.unique.tsv
ea335ca9abc255df6187be2e485e9ca3 *tests/testbw2.bed
