ad2a33642d92edc12c3c9b919fd385f2 *CITATION
dc4e25bfb143c1a68fd518e476143a20 *DESCRIPTION
a7f667224fe274f052aa76852f4facfa *INDEX
8eea64b2a3a38ec3fc0299b433abc407 *LICENSE
882e561319ae453380823409a37ee4cd *Meta/Rd.rds
52994484a220030bf15d4145df5eee64 *Meta/data.rds
8503e676975364d771072956cdbca633 *Meta/features.rds
9343a521c83bfa40fc57f26df0442997 *Meta/hsearch.rds
548a891f78c2d258476a82fe7eb41b8d *Meta/links.rds
db64143eada8468ed02765dc68af552a *Meta/nsInfo.rds
35dc2376be098885afe526948aa24e1d *Meta/package.rds
7d8df38694efb3d15f15efb82375b8c3 *Meta/vignette.rds
7383d810ae69d42bc03b94039f7164fd *NAMESPACE
d41d8cd98f00b204e9800998ecf8427e *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/cicero
302ab2e2eb6050f7a27e9f8efae16f4b *R/cicero.rdb
0b0045d4bf3908bb7aab5f71c79c7b47 *R/cicero.rdx
57b18788fdf7729e217e14e3b843e6fd *data/Rdata.rdb
7f13c6820aab0d7265d015451051ea75 *data/Rdata.rds
c961315e4ef52482f318762e0f452f27 *data/Rdata.rdx
fd6f7fd2d4950b76fa7258cc8b6340f0 *doc/index.html
4bad96ba4ba9947dd253147ea2de1711 *doc/website.R
8b643f29e046ca106d721c4687dab419 *doc/website.Rmd
d8ad89b670c9caf181e0b85b910fc6c8 *doc/website.html
2c97823a5963b338d6a49914326570db *help/AnIndex
cd408f0ee3468f75c20b315e1b4815a5 *help/aggregate_by_cell_bin.html
8c55b07b2bf52d8abd1fcb57b0ab9b7b *help/aggregate_nearby_peaks.html
e13501769569c95257098f0faeaa1786 *help/aliases.rds
e3607a458875644776d361820a692465 *help/annotate_cds_by_site.html
83fae3a8634263ced3b2427e21b4a325 *help/assemble_connections.html
648d45232d848eef76843364a5f45531 *help/build_gene_activity_matrix.html
ccaad56506e36b98ea40adad95417c3c *help/cell_data.html
0220924b74ff923f4838314b897a9c71 *help/cicero-package.html
0220924b74ff923f4838314b897a9c71 *help/cicero.html
cf8e72c33f7b0cddad10dd7f675deef6 *help/cicero.rdb
7f4cec37efd7d1a6313e72b5b03f40e6 *help/cicero.rdx
815dd061d7f034aefe7ee8d2203af6ad *help/cicero_data.html
6d47375ae64ac99be356aae3a8738694 *help/compare_connections.html
b485ee45d36b8acde7b79c30a8bf634d *help/df_for_coords.html
012be03d4b0e5237bc02d612184dcea8 *help/estimate_distance_parameter.html
b5fc231a50a9f25e4bc52764a797f1fc *help/find_overlapping_ccans.html
6f9f253af639b4dd8412e3476720823e *help/find_overlapping_coordinates.html
d81b62708c71ba0648695992a6ae6bc6 *help/gene_annotation_sample.html
44d09e5adcf9b0ad676e62b486b94bbc *help/generate_ccans.html
0c59d9d5bc0e79ceb305185134979ba2 *help/generate_cicero_models.html
1d600d16f1f22710a1ff939117817d69 *help/human.hg19.genome.html
05242101ea21639133251ae98b380e30 *help/make_atac_cds.html
1d074188ea7308807f39b4c3f92994f2 *help/make_cicero_cds.html
d3e8f2ba7741a005217ed4b8a478c31b *help/make_sparse_matrix.html
3cb0cdbecfae83f6ba74dd07dc175a5f *help/normalize_gene_activities.html
4db83f7acfd879768ed36e56d938677a *help/paths.rds
5dc46674259b91fe6c2a543a5350839e *help/plot_accessibility_in_pseudotime.html
f61d09040d2173c7b79d275dc517bee9 *help/plot_connections.html
bbfc9a099569bbab0c4d0510528ad7cc *help/ranges_for_coords.html
d3393052543a5ba252cc66a3aa340014 *help/run_cicero.html
af73dc8538b4aad5eafc3f9a99536000 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
72250915d9b249087f09106adb2a3278 *html/aggregate_by_cell_bin.html
54762efd4c0d68a4ca6d69a5127400e7 *html/aggregate_nearby_peaks.html
fa38ddb9486c530bc878fde4de385fde *html/annotate_cds_by_site.html
692d341d5e1c1c831142d0da96962356 *html/assemble_connections.html
71db7899763420120a4b1249e47be629 *html/build_gene_activity_matrix.html
fe1653f0aa9b811c79d11793e2df70e8 *html/cell_data.html
51a1cc8981b2c8a971528f08c94f410c *html/cicero-package.html
0d8f6bb6ac4f812b2259240c2a9b38d6 *html/cicero_data.html
df1a5a1970867ac458b10229f72d5ea9 *html/compare_connections.html
53766970d7142fd6a25791f5e25a4983 *html/df_for_coords.html
3ed70a4e73fb952568474c002e25ba8d *html/estimate_distance_parameter.html
2f010df0f553a385b7214836103cf393 *html/find_overlapping_ccans.html
cea20804570c28492aa708b26a0fc3d7 *html/find_overlapping_coordinates.html
8a799f21c0c491ac53202577db2885a6 *html/gene_annotation_sample.html
d80974d84dc512e2068c9b339ace4f22 *html/generate_ccans.html
d71fe12cccf2c657ed74c951781d4288 *html/generate_cicero_models.html
c345de03208d885efa7f7f8f40c6365b *html/human.hg19.genome.html
a2405b523d6815549c7363993307e367 *html/make_atac_cds.html
a14719c3d66da553ee977d74feaaeb2b *html/make_cicero_cds.html
10441b17d14f847e60d7e1f819b7bc29 *html/make_sparse_matrix.html
53a70b6486830ad0d9004de0ccbc5332 *html/normalize_gene_activities.html
24c835b87d0b96215651b304fd9a5eba *html/plot_accessibility_in_pseudotime.html
3ad4961c38904ddfc93e8a6d8fab6c62 *html/plot_connections.html
60d7ae466cc6baf04d73aafb36d675b9 *html/ranges_for_coords.html
ae050a6e08ad4b24939097e69c83e916 *html/run_cicero.html
