| +,AbSeqRep,AbSeqRep-method {abseqR} | R Documentation |
Combines 2 AbSeqRep objects together for comparison
## S4 method for signature 'AbSeqRep,AbSeqRep' e1 + e2
e1 |
AbSeqRep object. |
e2 |
AbSeqRep object. |
AbSeqCRep object. Calling abseqR's
functions on this object will always result in a comparison.
abseqReport returns a list of AbSeqReps
# Use example data from abseqR as abseqPy's output, substitute this
# with your own abseqPy output directory
abseqPyOutput <- tempdir()
file.copy(system.file("extdata", "ex", package = "abseqR"), abseqPyOutput, recursive=TRUE)
samples <- abseqReport(file.path(abseqPyOutput, "ex"), report = 0)
# The provided example data has PCR1, PCR2, and PCR3 samples contained within
# pcr1 and pcr2 are instances of AbSeqRep
pcr1 <- samples[["PCR1"]]
pcr2 <- samples[["PCR2"]]
# pcr12 is an instance of AbSeqCRep
pcr12 <- pcr1 + pcr2
# you can now call the report function on this object
# report(pcr12) # uncomment this line to execute report