UUO_data                UUO_data
addIds                  addIds
addPrefix               addPrefix
clusterCheck            clusterCheck
clusterList             clusterList
combineGenes            combineGenes
createClusters          createClusters
createClusters2         createClusters2
cytoMake                cytoMake
dataMiningMatrix        dataMiningMatrix
diffExpressRes          diffExpressRes
dloadGmt                dloadGmt
dloadMirdb              dloadMirdb
dloadMirtarbase         dloadMirtarbase
dloadTargetscan         dloadTargetscan
eNames                  eNames
e_list_mouse            e_list_mouse
enrichWiki              enrichWiki
genesList               genesList
getIdsMir               getIdsMir
getIdsMrna              getIdsMrna
gmtEnsembl              gmtEnsembl
hs_mRNA                 Human mRNA data set
hs_miR                  Human microRNA data set
hs_probes               hs_probes
linearRegr              linearRegr
long_data               Data from a longer time series (10 time points)
makeDynamic             makeDynamic
makeMapp                makeMapp
makeNet                 makeNet
matrixFilter            matrixFilter
miRTarBase              miRTarBase dataset
mirMrnaInt              mirMrnaInt
mm_mRNA                 Mouse microRNA data
mm_miR                  Mouse microRNA data
multiReg                multiReg
quickBar                quickBar
quickCrossCorr          quickCrossCorr
quickDMap               quickDMap
quickDendro             quickDendro
quickFuzz               quickFuzz
quickHClust             quickHClust
quickMap                quickMap
quickNet                quickNet
quickPathwayTC          quickPathwayTC
quickReg                quickReg
quickTC                 quickTC
quickTCPred             quickTCPred
reduceWiki              reduceWiki
returnCluster           returnCluster
savePlots               savePlots
significantVals         significantVals
startObject             startObject
turnPercent             turnPercent
w_list_mouse            Wikipathways lists for mouse produced by the
                        wikiList function.
wikiList                wikiList
wikiMatrix              wikiMatrix
wikiMrna                wikiMrna
