da5dd86d628b4413d8787b1f46b8dcf5 *CITATION
4cfa834fdcb13a8e64d2e4f3fdcaf0a2 *DESCRIPTION
2b9ee4dc7e2dda57895fe28dc570693b *INDEX
b016a35b60ed05b0c1e9c370b3c038b5 *Meta/Rd.rds
c8440c06be5e093e05779d74c0ffa6b7 *Meta/features.rds
d2cace0665833302e0e42abcc84da114 *Meta/hsearch.rds
8c1d5aff2ba456ae6c7a9df9a8396328 *Meta/links.rds
d67ced00def611922fcd087bc38fe47b *Meta/nsInfo.rds
97f828f4e63b301b825f1c5714806f9c *Meta/package.rds
663ddca2e9c4b161b85240ff794e3ace *Meta/vignette.rds
c2c24fe56a8741f4359995303304702f *NAMESPACE
5b2376e11f1acec84097f107d8d603df *NEWS.Rd
d6c68f1fe41ced6e98a766a3757313da *R/Rsubread
604ff391c67be730d30ea55c4c81ef43 *R/Rsubread.rdb
4bc788acf91784f189f83e3e0612da84 *R/Rsubread.rdx
0ccff75b48c76896d29ce557c803b158 *annot/hg19_RefSeq_exon.txt
08d9e787ae6480d7b9c1cde05d4bdfbb *annot/hg38_RefSeq_exon.txt
d8b19f0e062da6dcdc5ae32a7ceeab16 *annot/mm10_RefSeq_exon.txt
cb17837f0e18003cfb0f54bdb298e3de *annot/mm9_RefSeq_exon.txt
2630e720d93e1bf7038a571efbcc2ca7 *doc/Rsubread.R
227b89f8fd2a121da870299747fb5197 *doc/Rsubread.Rnw
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611cb814e0c7cd4edc6a17e1346d1dcd *doc/SubreadUsersGuide.pdf
72a5433dbaf57a6a2e7a05c7f95e6978 *doc/index.html
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dd811882ea60ee99824c241b8e66984d *extdata/reads.txt.gz
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4fb22dd42e7d167caf11e8e66d65aacc *extdata/reads2.txt.gz
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5f561f683aa6d2591c63e50d3aeee3af *help/AnIndex
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a983d87572fdcdd1898b7288444d98f6 *help/RsubreadUsersGuide.html
52a038b64368d26c8fa573e86744b708 *help/aliases.rds
8765713a2f70584056bc5e24ab1701ad *help/align.html
cec0f1a15260e56e5970f73c67151098 *help/atgcContent.html
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4af77e57006c82e36cae47fc58c7fb1f *help/cellCounts.html
fd41613a805e4bc25fb2d17dcd41fc84 *help/detectionCall.html
20b8160536fa6bb5dba8b608eba949db *help/detectionCallAnnotation.html
6be6a76ccd51458d2acd674a53e62df7 *help/exactSNP.html
e3e97d3f9413210afedb5d8ca5b42ab5 *help/featureCounts.html
702389f7f7ca4958ab67c3177ee1d1d2 *help/findCommonVariants.html
3b03b35db792abdf46460971847886c3 *help/flattenGTF.html
9e1c5a6faee56f3c8223f66a1b1ca1b2 *help/getInBuiltAnnotation.html
aa2e184b3e83f0e4b101131c608ba53f *help/paths.rds
d1e7033db1ed3cbea3728a976b419ccb *help/processExons.html
25e15816151f2064ebaff693ebd34a88 *help/promoterRegions.html
5603a655f87a2319c1b983d7d678c65f *help/propmapped.html
11738fa36e3e62229e0cb51b488a91ad *help/qualityScores.html
b85c71e9d70d1e8fc817dee8722b5f3b *help/removeDupReads.html
f3a7f406e9981295e23b9a7783d07d84 *help/repair.html
b47744a5cdb75e5e521fe9976187987a *help/sam2bed.html
efe52ad4eeff2dd7a3ad1b200ec49096 *help/scanFasta.html
efe52ad4eeff2dd7a3ad1b200ec49096 *help/simReads.html
8765713a2f70584056bc5e24ab1701ad *help/subjunc.html
2b2fbc7152bbd88e123f924fbe27ed16 *help/sublong.html
9b2ffbb0759e477457aea94ebecdbd23 *help/txUnique.html
49b52cb6cdcf954b82ca45403b05412e *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
aabad0051a01b73292cd7af289d2b49e *html/RsubreadUsersGuide.html
69e288a5ccdb4994987e0e13a890d0ed *html/align.html
6d1714e44cc8349404719e8c94a25571 *html/atgcContent.html
3ab247b3e275ea63aed9e7ce4f455a88 *html/buildindex.html
a0265b9aec39b00cfa5c56e0fb8ed559 *html/cellCounts.html
680fc8522a6633349e33c11c6a8092b4 *html/detectionCall.html
918063b2e97002c6e4db7c1409ac9804 *html/detectionCallAnnotation.html
d9563480e334755e5dbe25f64d63b593 *html/exactSNP.html
e1e0b0d460cab91ad40cb0883f3a7289 *html/featureCounts.html
122d89f676d39f2d218ed72abd832838 *html/findCommonVariants.html
cdeb31985e018da4bc9675c50856e9cd *html/flattenGTF.html
147b5e78840f1393157679bb3959950d *html/getInBuiltAnnotation.html
c6d8785d2cfb53f1948bb4a54e08458e *html/processExons.html
b944680783d726d5697363110431b500 *html/promoterRegions.html
403972a5241e5d52be06c01d8a4d32c9 *html/propmapped.html
9ba090efdf54708a41e6ac2ab3610665 *html/qualityScores.html
e18428a50d82723b9e6773479e9387a0 *html/removeDupReads.html
6e918f94a391bd9472c346efc9b2feb3 *html/repair.html
34bc67d5131805a83bd2dea3fe15dd98 *html/sam2bed.html
ce5f10d1b52d760b9041ecc67d955b56 *html/simReads.html
ddf878ddbd5c11c3d1dd26b2101c30e7 *html/sublong.html
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f7cdcbbbb2ed90f250d91ce117c47ed5 *libs/i386/Rsubread.dll
dfa3e01a54902e7d3fe1e9eea74f918b *libs/x64/Rsubread.dll
a17fa93fa3e77af18deaab47f4211f29 *qualf/ref-quality-strings-20k-100bp-ERR2_70-SRR3045231.txt
5f3496a46fe7f4f91682b1ad80506948 *qualf/ref-quality-strings-20k-75bp-ERR1_59-SRR3649332.txt
